Silvia Restrepo Restrepo

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Silvia Restrepo Restrepo

Silvia Restrepo Restrepo

Docteur, Sciences De La Vie Biologie, Diversite Et Adaptation Des Plantes

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Courses
Products
Degrees
Projects

Profile

I am a Full professor in the Chemical and Food department, at Universidad de los Andes. Currently, I am the Vicepresident for Research and Creation and was the head of the Biological Sciences department and Dean of the school of Sciences. I am a leading expert in plant pathology and has developed research on diseases of cassava and solanaceous crops. I teach food microbiology for undergraduate students and advanced molecular biology for graduate students. I have received several awards like, the Elizabeth Grose prize from the school of Sciences for my distinguished research, the Third World Academy of Sciences award to young scientists, the Prize from the Institut de Recherche pour le Développement, for my doctoral thesis and the Louis Malassis International Scientific Prize for agriculture and food. I have also received the Merit Ordre from the French Government. I have worked a lot for modernizing the career of microbiology at Universidad de los Andes and designed a minor in bioinformatics and a graduate program in Computational Biology. I enjoy teaching young kids in schools the scientific thinking and proposed to start a research program in STEM as an interdisciplinary endeavor gathering the schools of engineering, sciences and architecture and design.

Recent Courses

  • 2023

    • SEMINARIOS INVESTIGACIÓN L.D.

      First period
      Master Level
  • 2022

    • BIOLOGÍA MOLECULAR AVANZADA

      First period
      Master Level
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Recent Products

Mónica P. Cala, Guevara-Suarez M, Restrepo S, Sánchez-Camargo, A.P, Fernandez M, Cifuentes J, Serna J, Cruz J, Muñoz C, Gonzalez A. (2023)
Genome-Scale Metabolic Reconstruction, Non-Targeted LC-QTOF-MS Based Metabolomics Data, and Evaluation of Anticancer Activity of Cannabis sativa Leaf Extracts
Metabolites (ISSN 2218-1989)
Article
Read More
Henao L, Ramin Shirali Hossein Zade, Restrepo S, Husserl J, Abeel T. (2023)
Genomes of four Streptomyces strains reveal insights into putative new species and pathogenicity of scab-causing organisms
BMC Genomics (ISSN 1471-2164)
Article
Read More
View more

Recent Degrees

Docteur, Sciences De La Vie Biologie, Diversite Et Adaptation Des Plantes

Doctoral degree

Université Paris Vi

1999

Francia

Diplome D'Études Approfondies Phytopathologye

Master degree

Université Paris Vi

1994

Francia

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Recent Projects

  • 2023
    • Caracterización polifásica de microbioma asociado a diferentes sustratos en Colombia

      Duration: months

      PR.6.2023.10387

      Evaluation of biocompounds production from Colombian microalgae strains under stress conditions.

      Duration: 6 months

      PR.6.2023.10328

      Microalgae are a diverse group of photosynthetic microorganisms that inhabit both marine and freshwater environments (1,2). They offer potential applications in biotechnology, such as the production of biodiesel, wastewater remediation, and their use in food and pharmaceutical products (1,2). This is due to their  efficient oxygen photosynthesis, simple nutritional requirements, and the advantageous characteristics of microbial cell culture, such as rapid growth in liquid culture and the ability to synthesize or secrete various metabolites (1,2). Microalgae biomass possesses a significant chemical composition, including elevated levels of vitamins, proteins, polysaccharides, minerals, enzymes, and fibers (1). This biomass holds the potential to serve as a valuable source of bioactive compounds, such as bioactive peptides, polyphenols, essential amino acids, monounsaturated (MUFA) and polyunsaturated (PUFA) fatty acids, carotenoids, and phycocyanin (1,2).  Colombia, a country with extensive marine and oceanic waters, provides an ideal habitat for these microorganisms (3). Various regions of Colombia have been identified through metagenomics and microbial ecology approaches to have a presence of microalgae (3) @font-face {font-family:Batang; panose-1:2 3 6 0 0 1 1 1 1 1; mso-font-alt:바탕; mso-font-charset:129; mso-generic-font-family:roman; mso-font-pitch:variable; mso-font-signature:-1342176593 1775729915 48 0 524447 0;}@font-face {font-family:"Cambria Math"; panose-1:2 4 5 3 5 4 6 3 2 4; mso-font-charset:0; mso-generic-font-family:roman; mso-font-pitch:variable; mso-font-signature:-536870145 1107305727 0 0 415 0;}@font-face {font-family:"\@Batang"; panose-1:2 3 6 0 0 1 1 1 1 1; mso-font-charset:129; mso-generic-font-family:roman; mso-font-pitch:variable; mso-font-signature:-1342176593 1775729915 48 0 524447 0;}p.MsoNormal, li.MsoNormal, div.MsoNormal {mso-style-unhide:no; mso-style-qformat:yes; mso-style-parent:""; margin:0cm; mso-pagination:widow-orphan; text-autospace:none; font-size:10.0pt; font-family:"Times New Roman",serif; mso-fareast-font-family:"Times New Roman"; mso-ansi-language:ES; mso-fareast-language:ES;}.MsoChpDefault {mso-style-type:export-only; mso-default-props:yes; font-size:10.0pt; mso-ansi-font-size:10.0pt; mso-bidi-font-size:10.0pt; mso-font-kerning:0pt; mso-ligatures:none; mso-ansi-language:ES-CO; mso-fareast-language:ES-CO;}div.WordSection1 {page:WordSection1;}@font-face {font-family:Batang; panose-1:2 3 6 0 0 1 1 1 1 1; mso-font-alt:바탕; mso-font-charset:129; mso-generic-font-family:roman; mso-font-pitch:variable; mso-font-signature:-1342176593 1775729915 48 0 524447 0;}@font-face {font-family:"Cambria Math"; panose-1:2 4 5 3 5 4 6 3 2 4; mso-font-charset:0; mso-generic-font-family:roman; mso-font-pitch:variable; mso-font-signature:-536870145 1107305727 0 0 415 0;}@font-face {font-family:"\@Batang"; panose-1:2 3 6 0 0 1 1 1 1 1; mso-font-charset:129; mso-generic-font-family:roman; mso-font-pitch:variable; mso-font-signature:-1342176593 1775729915 48 0 524447 0;}p.MsoNormal, li.MsoNormal, div.MsoNormal {mso-style-unhide:no; mso-style-qformat:yes; mso-style-parent:""; margin:0cm; mso-pagination:widow-orphan; text-autospace:none; font-size:10.0pt; font-family:"Times New Roman",serif; mso-fareast-font-family:"Times New Roman"; mso-ansi-language:ES; mso-fareast-language:ES;}.MsoChpDefault {mso-style-type:export-only; mso-default-props:yes; font-size:10.0pt; mso-ansi-font-size:10.0pt; mso-bidi-font-size:10.0pt; mso-font-kerning:0pt; mso-ligatures:none; mso-ansi-language:ES-CO; mso-fareast-language:ES-CO;}div.WordSection1 {page:WordSection1;} @font-face {font-family:Batang; panose-1:2 3 6 0 0 1 1 1 1 1; mso-font-alt:바탕; mso-font-charset:129; mso-generic-font-family:roman; mso-font-pitch:variable; mso-font-signature:-1342176593 1775729915 48 0 524447 0;}@font-face {font-family:"Cambria Math"; panose-1:2 4 5 3 5 4 6 3 2 4; mso-font-charset:0; mso-generic-font-family:roman; mso-font-pitch:variable; mso-font-signature:-536870145 1107305727 0 0 415 0;}@font-face {font-family:"\@Batang"; panose-1:2 3 6 0 0 1 1 1 1 1; mso-font-charset:129; mso-generic-font-family:roman; mso-font-pitch:variable; mso-font-signature:-1342176593 1775729915 48 0 524447 0;}p.MsoNormal, li.MsoNormal, div.MsoNormal {mso-style-unhide:no; mso-style-qformat:yes; mso-style-parent:""; margin:0cm; mso-pagination:widow-orphan; text-autospace:none; font-size:10.0pt; font-family:"Times New Roman",serif; mso-fareast-font-family:"Times New Roman"; mso-ansi-language:ES; mso-fareast-language:ES;}.MsoChpDefault {mso-style-type:export-only; mso-default-props:yes; font-size:10.0pt; mso-ansi-font-size:10.0pt; mso-bidi-font-size:10.0pt; mso-font-kerning:0pt; mso-ligatures:none; mso-ansi-language:ES-CO; mso-fareast-language:ES-CO;}div.WordSection1 {page:WordSection1;}

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Courses

  • 2023

    • SEMINARIOS INVESTIGACIÓN L.D.

      First period
      Master Level
  • 2022

    • BIOLOGÍA MOLECULAR AVANZADA

      First period
      Master Level

      DISEÑANDO EL FUTURO DE LA ALIM

      First period
      Bachelor Level

    • MICROBIOLOGÍA DE ALIMENTOS

      Second period
      Bachelor Level

      MICROBIOLOGÍA DE ALIMENTOS

      First period
      Bachelor Level

    • TRABAJO GRADO, MONOGR, PRAC.GR

      Second period
      Bachelor Level
  • 2021

    • LAB.MICROBIOLOGÍA DE ALIMENTOS

      First period
      Bachelor Level

      MICROBIOLOGÍA DE ALIMENTOS

      First period
      Bachelor Level

    • SEMINARIOS INVESTIGACIÓN L.D.

      Second period
      Master Level

      SEMINARIOS INVESTIGACIÓN L.D.

      First period
      Master Level

    • MICROBIOLOGÍA DE ALIMENTOS

      Second period
      Bachelor Level
  • 2020

    • SEMIN.INVESTIGACIÓN DOC. L.D.1

      First period
      Doctoral Level

      BIOLOGÍA MOLECULAR AVANZADA

      First period
      Master Level

    • GENÓMICA Y BIOINFORMÁTICA

      First period
      Bachelor Level

      MICROBIOLOGÍA DE ALIMENTOS

      Second period
      Bachelor Level

    • LAB.MICROBIOLOGÍA DE ALIMENTOS

      Second period
      Bachelor Level

      SEMIN.INVESTIGACIÓN DOC. L.D.1

      Second period
      Doctoral Level
  • 2019

    • SEMINARIOS INVESTIGACION L.D.

      First period
      Master Level

      FITOPATOLOGIA-TEO

      First period
      Bachelor Level

    • BIOTECNOLOGÍA VEGETAL

      Second period
      Bachelor Level

      SEMIN.INVESTIGACION DOC. L.D.1

      First period
      Doctoral Level

    • FITOPATOLOGIA-TEO

      Second period
      Bachelor Level

      SEMINARIOS INVESTIGACION L.D.

      Second period
      Master Level

    • BIOLOGÍA MOLECULAR AVANZADA

      First period
      Master Level

      SEMIN.INVESTIGACION DOC. L.D.1

      Second period
      Doctoral Level
  • 2018

    • FITOPATOLOGIA-TEO

      First period
      Bachelor Level

      FITOPATOLOGIA-TEO

      Second period
      Bachelor Level

    • TESIS 4 CR

      First period
      Master Level

      TESIS 8 CR

      First period
      Master Level

    • TESIS 2 - 8 CR

      First period
      Master Level

      POYECTO FINAL

      First period
      Master Level

    • TESIS 4 CR

      Second period
      Master Level

      TESIS 2 - 8 CR

      Second period
      Master Level

    • POYECTO FINAL

      Second period
      Master Level

      SEMINARIOS INVESTIGACION L.D.

      Second period
      Master Level

    • BIOLOGÍA MOLECULAR AVANZADA

      First period
      Master Level

      TESIS 2 - 4 CR

      First period
      Master Level

    • SEMINARIOS INVESTIGACION L.D.

      First period
      Master Level

      TESIS 2 - 4 CR

      Second period
      Master Level

    • TESIS 8 CR

      Second period
      Master Level
  • 2017

    • BIOLOGÍA MOLECULAR AVANZADA

      First period
      Master Level

      FITOPATOLOGIA-TEO

      First period
      Bachelor Level

    • SEMINARIOS INVESTIGACION L.D.

      First period
      Master Level

      SEMINARIO DE MICROBIOLOGIA

      First period
      Bachelor Level

    • POYECTO FINAL

      First period
      Master Level

      TESIS 4 CR

      First period
      Master Level

    • TESIS 8 CR

      First period
      Master Level

      FITOPATOLOGIA-TEO

      Second period
      Bachelor Level

    • POYECTO FINAL

      Second period
      Master Level

      HERRAMIENTAS GENOMICAS-LD

      Second period
      Master Level

    • TESIS 4 CR

      Second period
      Master Level

      TESIS 8 CR

      Second period
      Master Level
  • 2016

    • SEMINARIO DE MICROBIOLOGIA

      First period
      Bachelor Level

      FUNDAMENTOS DE BIOLOGIA MOLEC.

      First period
      Master Level

    • SEMIN.INVESTIGACION DOC. L.D.2

      First period
      Doctoral Level

      SEMIN.INVESTIGACION DOC. L.D.1

      First period
      Doctoral Level

    • SEMINARIOS INVESTIGACION L.D.

      First period
      Master Level

      BIOLOGIA DE HONGOS-TEO

      First period
      Bachelor Level

    • BIOLOGÍA MOLECULAR AVANZADA

      First period
      Master Level

      SEMIN.INVESTIGACION DOC. L.D.2

      Second period
      Doctoral Level

    • SEMINARIO DE MICROBIOLOGIA

      Second period
      Bachelor Level

      BIOLOGIA DE HONGOS-TEO

      Second period
      Bachelor Level

    • SEMIN.INVESTIGACION DOC. L.D.1

      Second period
      Doctoral Level

      TESIS 8 CR

      Second period
      Master Level

    • SEMINARIOS INVESTIGACION L.D.

      Second period
      Master Level

      POYECTO FINAL

      Second period
      Master Level

    • TESIS 4 CR

      Second period
      Master Level
  • 2015

    • SEMINARIO DE MICROBIOLOGIA

      First period
      Bachelor Level

      SEMINARIOS INVESTIGACION L.D.

      First period
      Master Level

    • FITOPATOLOGIA-TEO

      First period
      Bachelor Level

      FUNDAMENTOS DE BIOLOGIA MOLEC.

      First period
      Master Level

    • BIOLOGÍA MOLECULAR AVANZADA

      First period
      Master Level

      SEMINARIOS INVESTIGACION L.D.

      Second period
      Master Level

    • SEMINARIO DE MICROBIOLOGIA

      Second period
      Bachelor Level

      SEMIN.INVESTIGACION DOC. L.D.2

      Second period
      Doctoral Level

    • BIOLOGIA DE HONGOS-TEO

      Second period
      Bachelor Level

      SEMIN.INVESTIGACION DOC. L.D.1

      Second period
      Doctoral Level

    • FUNDAMENTOS DE BIOLOGIA MOLEC.

      Second period
      Master Level
  • 2014

    • BIOLOGÍA MOLECULAR AVANZADA

      First period
      Master Level

      SEMINARIOS INVESTIGACION L.D.

      First period
      Master Level

    • SEMINARIOS INVESTIGACION L.D.

      Second period
      Master Level

      SEMIN.INVESTIGACION DOC. L.D.1

      First period
      Doctoral Level

    • SEMIN.INVESTIGACION DOC. L.D.2

      First period
      Doctoral Level

      FUNDAMENTOS DE BIOLOGIA MOLEC.

      Second period
      Master Level

    • GENOMICA Y BIOINFORMATICA

      First period
      Bachelor Level

      FITOPATOLOGIA-TEO

      Second period
      Bachelor Level
  • 2013

    • GENOMICA Y BIOINFORMATICA

      First period
      Bachelor Level

      BIOLOGÍA MOLECULAR AVANZADA

      First period
      Master Level

    • GENOMICA Y BIOINFORMATICA

      Second period
      Bachelor Level

Products

Mónica P. Cala, Guevara-Suarez M, Restrepo S, Sánchez-Camargo, A.P, Fernandez M, Cifuentes J, Serna J, Cruz J, Muñoz C, Gonzalez A. (2023)
Genome-Scale Metabolic Reconstruction, Non-Targeted LC-QTOF-MS Based Metabolomics Data, and Evaluation of Anticancer Activity of Cannabis sativa Leaf Extracts
Metabolites (ISSN 2218-1989)
Article
Read more
Henao L, Ramin Shirali Hossein Zade, Restrepo S, Husserl J, Abeel T. (2023)
Genomes of four Streptomyces strains reveal insights into putative new species and pathogenicity of scab-causing organisms
BMC Genomics (ISSN 1471-2164)
Article
Read more
Ramirez A, Contreras S, Murrain H, Vallejo B, Hernández M, Velasco N, Restrepo S. (2023)
Vaccination against COVID-19 in Bogotá - Colombia: lessons and strategies in health pedagogy, risk communication and community participation, using behavioral sciences
Infectio  (ISSN 0123-9392)
Article
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Contreras S, Murrain H, Vallejo B, Velasco N, Restrepo S, Ramirez A. (2023)
Vacunación contra el COVID-19 en Bogotá, Colombia: lecciones y estrategias en pedagogía en salud, comunicación del riesgo y participación comunitaria usando ciencias del comportamiento
Infectio  (ISSN 0123-9392)
Article
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Crawford AJ, Restrepo S. (2022)
Comentario sobre el artículo EBP-Colombia and the bioeconomy: Genomics in the service of biodiversity conservation and sustainable development de Joseph E. A. Huddart, Andrew J. Crawford, Arturo L. Luna-Tapia, Silvia Restrepo y Federica Di Palma
Revista de la Academia Colombiana de Ciencias exactas, Físicas y Naturales (ISSN 0370-3908)
Article
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Archila P, Restrepo S, Truscott A, Bloch NI. (2022)
Drama as a Powerful Tool to Enrich Socio‐scientific Argumentation
International Journal of Science and Mathematics Education (ISSN ISSN: 1571-0068 (print version)ISSN: 1573-1774 (electronic version))
Article
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Ramirez A, Restrepo S, Campaz Y, Tamayo GE, Contreras S, Caballero Y, Hernandez L, Gonzalez J, Santos J, Pinzón J, Yepes-Nuñez Juan Jose, Buitrago G, Laajaj R, Vives M, Fuentes J, Casas A, Quinche G, Behrentz E. (2022)
Effectiveness and adherence to closed face shields in the prevention of COVID-19 transmission: a non-inferiority randomized controlled trial in a middle-income setting (COVPROSHIELD)
Trials (ISSN 1745-6215)
Article
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Archila P, Restrepo S, Truscott A, Rueda R, Bloch NI. (2022)
Fostering instructor-student argumentative interaction in online lecturing to large groups: a study amidst the Covid-19 pandemic
Revista Eureka (ISSN 1697-011X)
Article
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Henao L, Guevara M, Restrepo S, Husserl J, Restrepo S, Guevara-Suarez M, Henao L. (2022)
Genotypic and phenotypic characterization of Streptomyces species associated with potato crops in the central part of Colombia
Plant Pathology (ISSN 0032-0862)
Article
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ter Horst E, Gunn L, Restrepo S. (2022)
Hierarchical Bayesian Classi cation Methods to Identify Topics by Journal Quartile with an Application in Biological Sciences.
Education for Information (ISSN 1875-8649)
Article
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Gamarra O, Hernández-Carrión M, Restrepo S. (2022)
Meat Substitute Development from Fungal Protein (Aspergillus oryzae)
Foods (ISSN 2304-8158)
Article
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Luuu S, Duplat D, Benitez P, Leon C, Villota S, Veloz-Villavicencio E, Arevalo V, Jaenes K, Guoo Y, Cicek S, Robinson L, Peidis P, Pearson J, Woodgett J, Mazzulli T, Ponce P, Restrepo S, Gonzalez J, Bernal A, Guevara-Suarez M, Pardee K, Cevallos V, González C, Bremner R. (2022)
Multicenter international assessment of a SARS-CoV-2 RT-LAMP test for point of care clinical application
PLoS ONE (ISSN 1932-6203)
Article
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Ramirez A, Moreno S, Contreras S, Tamayo GE, Restrepo S, Sarmiento-barbieri I, Caballero Y, Hernandez L, Gonzalez J, Salas-Zapata L, Laajaj R, Buitrago G, de la Hoz JF, Vives M, Osorio E, Rios D, Behrentz E. (2022)
Prediction of SARS-CoV-2 Infection With a Symptoms-Based Model to Aid Public Health Decision Making in Latin America and other Low and Middle Income Settings
Preventive Medicine (ISSN 0091-7435)
Article
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Ramirez A, Contreras S, Tamayo GE, Salas-Zapata L, Caballero Y, Hernandez L, Laajaj R, La F, Buitrago G, Restrepo S, Behrentz E. (2022)
Risk factors for SARS-CoV-2 transmission in close contacts of adults at high risk of infection due to occupation: results from the contact tracing strategy of the CoVIDA epidemiological surveillance study in Bogotá, Colombia, in 2020–2021
BMJ OPEN (ISSN 2044-6055)
Article
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Ramirez A, Behrentz E, Tamayo GE, Hernandez L, Rodríguez P, Laajaj R, Leon L, Buitrago G, Vives M, Restrepo S, Contreras S, Caballero Y, Rodriguez D, Bernal R, Gaviria A. (2022)
SARS-CoV-2 Drive/Walk-Thru screening centers in Colombia: The CoVIDA project
Infectio  (ISSN 0123-9392)
Article
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Laajaj R, Webb D, Aristizabal D, Behrentz E, Bernal R, Buitrago G, Cucunuba Z, de la Hoz JF, Gaviria A, Hernandez L, De C, Ramirez A, Restrepo S, Schady N, Vives M. (2022)
Understanding how socioeconomic inequalities drive inequalities in COVID-19 infections
SCIENTIFIC REPORTS (ISSN 2045-2322)
Article
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Laajaj R, De C, Sarmiento I, Aristizabal D, Behrentz E, Bernal R, Buitrago G, Cucunuba Z, La F, Gaviria A, Hernandez L, Leon L, Moyano D, Osorio E, Ramirez A, Restrepo S, Rodriguez R, Schady N, Vives M, Webb D. (2021)
SARS-CoV-2 spread, detection, And dynamics in a megacity in Latin America
Other Publication
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Ayala D, Cardenas M, Guyot R, Chaib M, Bernal A, Reyes A, Restrepo S. (2021)
A whole genome duplication drives the genome evolution of Phytophthora betacei, a closely related species to Phytophthora infestans
BMC Genomics (ISSN 1471-2164)
Article
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Mejia C, Farfan D, Montaña J, Restrepo S, Jiménez P, Danies G, Rodriguez M. (2021)
Acibenzolar-S-methyl induces protection against the vascular wilt pathogen Fusarium oxysporum in cape gooseberry (Physalis peruviana L.)
Journal of Plant Diseases and Protection (ISSN 1861-3829)
Article
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Mantilla M, Cabrera C, Ariza G, Hans de Cock, Helms B, Restrepo S, Jiménez E, Celis Ramírez AM. (2021)
Back to the Basics: Two Approaches for the Identification and Extraction of Lipid Droplets from Malassezia pachydermatis CBS1879 and Malassezia globosa CBS7966
Current Protocols (ISSN 2691-1299)
Article
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Laajaj R, De Los Rios C, Sarmiento-barbieri I, Aristizabal D, Behrentz E, Bernal R, Buitrago G, Cucunubá Z, La F, Gaviria A, Hernandez L, Leon L, Moyano D, Osorio E, Ramirez A, Restrepo S, Rodriguez R, Schady N, Vives M, Webb D, Bernal R, Sarmiento I. (2021)
COVID-19 spread, detection, and dynamics in Bogota, Colombia
Nature Communications (ISSN 2041-1723)
Article
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Laajaj R, Sarmiento I, De C, Aristizabal D, Behrentz E, Bernal R, Buitrago G, Cucunuba Z, La F, Gaviria A, Hernandez L, León L, Moyano D, Osorio E, Ramirez A, Restrepo S, Rodriguez R, Schady N, Vives M, Webb D. (2021)
CoVIDA
Other Publication
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Herrera F, Fernandez M, Restrepo S, Rodriguez M, Gonzalez A. (2021)
Dissecting industrial fermentations of fine flavour cocoa through metagenomic analysis
SCIENTIFIC REPORTS (ISSN 2045-2322)
Article
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Ramirez A, Hernandez L, Tamayo GE, Contreras S, Restrepo S, Laajaj R, Buitrago G, Rueda Y, Caballero Y, Vives M, Osorio E, Barbieri I, Rodriguez D, Leon L, Bernal R, Guevara-Suarez M, Gaviria A, Behrentz E, Bernal R, Sarmiento I. (2021)
Factors Associated With SARS-CoV-2 Infection in Bogotá, Colombia: Results From a Large Epidemiological Surveillance Study
The Lancet Regional Health - Américas (ISSN 2667-193X)
Article
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Celis Ramírez AM, Guevara-Suarez M, Restrepo S, et al.. (2021)
Fusarium: more than a node or a foot-shaped basal cell
Studies in Mycology (ISSN 0166-0616)
Article
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Luengas E, Guhl A, Restrepo S, Gonzalez-Garcia L. (2021)
Modeling the correlation between potato disease spread and climate variables to guide fungicide applications in Cundinamarca, Colombia
Naturaleza y Sociedad. Desafíos Medioambientales (ISSN 0000-0100)
Article
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Laajaj R, Sarmiento-barbieri I, De C, Aristizabal D, Behrentz E, Bernal R, Buitrago G, Cucunuba Z, La F, Gaviria A, Hernandez L, Moyano D, Osorio E, Ramirez A, Restrepo S, Rodriguez R, Schady N, Vives M, Webb D. (2021)
Notas de Política Proyecto CoVIDA
Other Publication
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Archila P, Molina J, Danies G, Truscott A, Restrepo S. (2021)
Providing Undergraduates with Opportunities to Explicitly Reflect on How News Articles Promote the Public (Mis)understanding of Science
Science and Education (ISSN 0926-7220)
Article
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Ramirez A, Restrepo S, Behrentz E. (2021)
Proyecto CoVIDA en The Lancet Regional Health - Americas. Universidad de los Andes (Noticias)
Journalistic Production
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Laajaj R, Ramirez A, Restrepo S, Gaviria A, Hernandez L. (2021)
Proyecto CoVIDA. Saludata
Boletin Del Observatorio En Salud (ISSN 2027-4025)
Article
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Salamanca M, Zambrano C, Mejia J, Motta A, Jiménez P, Restrepo S, Celis Ramírez AM. (2021)
Seborrheic dermatitis and its relationship with Malassezia spp
Infectio  (ISSN 0123-9392)
Article
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Zarate C, Osorio D, Mora R, Perez A. L., Dereeper A, Restrepo S, Lopez C, Szurek B, Bernal A. (2021)
TAL effector repertoires of strains of Xanthomonas phaseoli Pv. Manihotis in commercial cassava crops reveal high diversity at the country scale
Microorganisms (ISSN 2076-2607)
Article
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Montenegro N, Alvarez A, Arrieta M, Rodriguez L. M., Botero D, Tabima J, Castiblanco L, Trujillo C, Restrepo S, Bernal A. (2021)
The type VI secretion system of Xanthomonas phaseoli pv. manihotis is involved in virulence and in vitro motility
BMC Microbiology (ISSN 1471-2180)
Article
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Danies G, Archila P, Molina J, Restrepo S. (2021)
Towards Covid-19 Literacy
Article
Archila P, Danies G, Molina J, Truscott A, Restrepo S. (2021)
Towards Covid-19 Literacy: Investigating the Literacy Levels of University Students in Colombia
Science and Education (ISSN 0926-7220)
Article
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Betancourt PL, Guevara-Suarez M, Hidalgo M, Restrepo S, Potdevin E, Huertas J, Medaglia A, Pedraza J, Cepeda M, Arbelaez P. (2020)
El papel de la ingeniería en la pandemia de COVID-19
Revista de Ingeniería: Universidad de los Andes (ISSN 2011-0049)
Article
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Vargas N, Restrepo S. (2020)
A Checklist of Ectomycorrhizal Mushrooms Associated with Quercus humboldtii in Colombia
Mushrooms, Humans and Nature in a Changing World (ISBN 978-3-030-37377-1)
Inbook
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Saenz V, Alvarez-Moreno C, Le Pape P, Restrepo S, Guarro J, Celis Ramírez AM. (2020)
A one health perspective to recognize Fusarium as important in clinical practice
Journal of Fungi (ISSN 2309-608X)
Article
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Celis Ramírez AM, Amezquita A, Cardona J, Matiz L, Andrade J, Triana S, Mantilla M, Restrepo S, Gonzalez A, Hans de Cock. (2020)
Analysis ofMalasseziaLipidome Disclosed Differences Among the Species and Reveals Presence of Unusual Yeast Lipids
Frontiers in Cellular and Infection Microbiology (ISSN 2235-2988)
Article
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Duplat D, Restrepo S, Cardenas M.
Antimicrobial activity of endophytic fungi from the silver frailejon (Espeletia argentea) against Phytophthora infestans
Event
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Gaviria A, Bernal R, Vives M, Restrepo S, Behrentz E, Buitrago G, Laajaj R, Hernandez L, Ramirez A, Hidalgo M, Tamayo J. (2020)
Boletín Epidemiológico Distrital (BED)
Boletín Epidemiológico Distrital (ISSN 0123-8590)
Article
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Bolanos N, Burbano D, Jurado D, Rodriguez E, Gonzalez C, Jaimes Y, Restrepo S.
CacaoBIO: Characterization of Plant Pathogens in Native Forest Cocoa Trees
Event
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Mantilla M, Ariza G, Cabrera C, Helms B, Restrepo S, Celis Ramírez AM. (2020)
Caracterización de lo desconocido: un acercamiento a la estructura y composición de los Lipid Doplets de Malassezia pachydermatis CBS 1879.
Infectio  (ISSN 0123-9392)
Article
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Ramírez J, Guevara-Suarez M, Cardenas M, Duarte D, Gutierrez E, Restrepo S.(2020).
Characterization and population structure of Phytophthora palmivora in Theobroma cacao L. crops of Colombia.
Event
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Henao L, Guevara-Suarez M, Restrepo S, Husserl J.(2020).
Characterization of Causing Scab Disease Streptomyces Isolates in Colombia
Event
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Mantilla M, Cabrera C, Ariza G, Hans de Cock, Helms B, Restrepo S, Celis Ramírez AM.(2020).
Characterizing the unknown: an approach to the structure and composition of lipid droplets in Malassezia pachydermatis CBS 1879
Event
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Mongui A, Lozano G, Handelsman J, Restrepo S, Junca H. (2020)
Design and validation of a transposon that promotes expression of genes in episomal DNA
Journal of Biotechnology (ISSN 0168-1656)
Article
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Buitrago F, Danies G, Restrepo S, Hernandez C. (2020)
Designing a Socio-Cultural Approach for Teaching and Learning Computational Thinking
Nordic Journal of Digital Literacy (ISSN 0809-6724)
Article
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Mideros M, Mayton H, Danies G, Lagos L, Fry W. E., Restrepo S. (2020)
Differential Susceptibility of Tree Tomato (Solanum betaceum) Cultivars to Late Blight Caused by Phytophthora betacei
Plant Disease (ISSN 0191-2917)
Article
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Durán-Aranguren, D., Chirivi J, Anaya L, Durán-Sequeda, D, Cruz L, Serrano J, Sarmiento L, Restrepo S, Sierra R. (2020)
Effect of bioactive compounds extracted from Cordyceps nidus ANDES-F1080 on laccase activity of Pleurotus ostreatus ANDES-F515
Biotechnology Reports (ISSN 2215017X)
Article
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Rojas-Estevez P, Urbina D, Ayala D, Guayazan N, Mideros M, Bernal A, Cardenas M, Restrepo S. (2020)
Effector Repertoire of Phytophthora betacei: In Search of Possible Virulence Factors Responsible for Its Host Specificity
Frontiers in Genetics (ISSN 1664-8021)
Article
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Corradine S .(2020). Endophytic fungal diversity in cultivated Solanum quitoense (Solanaceae) in the departments of Boyacá and Cundinamarca (Colombia).
Endophytic fungal diversity in cultivated Solanum quitoense (Solanaceae) in the departments of Boyacá and Cundinamarca (Colombia)
Thesis
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Torres V .(2020). Environment and Phytopathogens: Is Climate Change a Trigger for Plant Diseases?.
Environment and Phytopathogens: Is Climate Change a Trigger for Plant Diseases?
Thesis
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Dcosta Z .(2020). Epigenética fantástica y cómo estudiarla en oomicetes.
Epigenética fantástica y cómo estudiarla en oomicetes
Thesis
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Ehemann K, Sastoque A, Guevara-Suarez M, Restrepo S, Hans de Cock, Gonzalez A, Celis Ramírez AM.(2020).
Evaluation of new candidates for Malassezia spp. growth inhibition
Event
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Ortiz D, Gonzalez J, Danies G, Fry W. E., Restrepo S.
Evaluation of the Virulence of Phytophthora betacei Sporangia Produced on Artificial media and Solanum betaceum Leaf Lesions
Event
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Rodriguez M, Restrepo S, Gonzalez A, Botero D.
Genome Scale Metabolic Models of Phytophthora infestans and Phytophthora betacei: A Key Tool to Understand Phytopathogens Metabolic Capabilities
Event
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Botero D, Monk J, Rodriguez M, Rodriguez A, Restrepo M, Bernal V, Reyes A, Gonzalez A, Palsson B, Restrepo S, Bernal A. (2020)
Genome-Scale Metabolic Model of Xanthomonas phaseoli pv. manihotis: An Approach to Elucidate Pathogenicity at the Metabolic Level
Frontiers in Genetics (ISSN 1664-8021)
Article
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Ayala D, Danies G, Myers P, Bond M, Romero-Navarro J, Judelson H, Restrepo S, Fry W. E.. (2020)
Genome-Wide Association Study Identifies Single Nucleotide Polymorphism Markers Associated with Mycelial Growth (at 15, 20, and 25 degrees C), Mefenoxam Resistance, and Mating Type in Phytophthora infestans
Phytopathology (ISSN 0031-949X)
Article
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Gil J, Herrera M, Duitama J, Sarria G, Restrepo S, Romero H. (2020)
Genomic Variability of Phytophthora palmivora Isolates from Different Oil Palm Cultivation Regions in Colombia
Phytopathology (ISSN 0031-949X)
Article
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Gonzalez J, Childers R, Olave A, Regnier M, Rodriguez A, Fry W. E., Restrepo S, Danies G. (2020)
Is the Phenomenon of Mefenoxam-Acquired Resistance in Phytophthora infestans Universal?
Plant Disease (ISSN 0191-2917)
Article
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Sastoque A, Triana S, Ehemann K, Suarez L, Restrepo S, Fernandez M, Gonzalez A, Celis Ramírez AM. (2020)
New Therapeutic Candidates for the Treatment of Malassezia pachydermatis -Associated Infections
SCIENTIFIC REPORTS (ISSN 2045-2322)
Article
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Regnier M, Gonzalez J, Cardenas M, Restrepo S, Danies G.
Originally mefenoxam-sensitive isolates of Phytophthora infestans are able to quickly acquire and lose resistance
Event
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Vargas N, Gutierrez C, Restrepo S, Velasco N. (2020)
Oyster Mushroom Cultivation as an Economic and Nutritive Alternative for Rural Low-Income Women in Villapinzón (Colombia)
Women in Industrial and Systems Engineering (ISBN 978-3-030-11865-5)
Inbook
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Parada-Pinilla M, Diaz-cardenas C, Lopez G, Diaz J, Gonzalez-Garcia L, Restrepo S, Trujillo M, Baena S. (2020)
Salifodinibacter halophilus gen. nov., sp. nov., a halophilic gammaproteobacterium in the family Salinisphaeraceae isolated from a salt mine in the Colombian Andes
International Journal of Systematic and Evolutionary Microbiology (ISSN 1466-5026)
Article
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Gomez V, Marquez R, Jahn A, Miyaki C, Tuero D, Laverde O, Restrepo S, Cadena C. (2020)
Speciation Associated with Shifts in Migratory Behavior in an Avian Radiation
Current Biology (ISSN 0960-9822)
Article
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Bautista D, Guayazan N, Botero D, Duitama J, Bernal A, Restrepo S.
Time series transcriptome analysis reveals adaptable activation of defense related genes in tree tomato infected with late blight
Event
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Laajaj R, De Los Rios C, Sarmiento-barbieri I, Aristizabal D, Behrentz E, Bernal R, Buitrago G, Cucunuba Z, La F, Gaviria A, Hernandez L, Leon L, Moyano D, Osorio E, Ramirez A, Restrepo S, Rodriguez R, Schady N, Vives M, Webb D.
Trabajo dirigido/tutoría: Examinando la influencia de la ideología política en la mitigación del COVID-19 en las Américas
Other
Buitrago M, Restrepo S, Bernal A.
Transcriptional Expression Pattern in Effector Genes of Phytophthora betacei
Event
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Castillo A, Cañas S, Guevara-Suarez M, Guarro J, Restrepo S, Celis Ramírez AM. (2020)
Transcriptional response of fusarium oxysporum and neocosmospora solani challenged with amphotericin B or posaconazole
Microbiology (ISSN 1350-0872)
Article
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Chaves S, Guayazan N, Mideros M, Parra M, Lucca F, Restrepo S. (2020)
Two Clonal Species of Phytophthora Associated to Solanaceous Crops Coexist in Central and Southern Colombia
Phytopathology (ISSN 0031-949X)
Article
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Janssen G, Restrepo S. (2019)
A Utilization-Focused Program Evaluation of an ERPP Tutoring Service at One Colombian University
Pedagogies and Policies for Publishing Research in English: Local Initiatives Supporting International Scholars (ISBN 978-1-138-55808-3)
Inbook
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Rache L, Blondin L, Flores C, Trujillo C, Szurek B, Restrepo S, Koebnik R, Bernal A, Verniere C. (2019)
An Optimized Microsatellite Scheme for Assessing Populations of Xanthomonas phaseoli pv. Manihotis
Phytopathology (ISSN 0031-949X)
Article
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Buitrago F, Danies G, Restrepo S, Hernandez C. (2019)
Boosting 21st Century Competences through Computational Thinking and Student Centered Strategies
PAEE/ALE’ 2019 "Preparing Teachers and Students for Challenging Times in Engineering Education”
Inproceeding
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Ramírez J .(2019). Characterization of oomycetes collected from Theobroma cacao L. crops in Colombia.
Characterization of oomycetes collected from Theobroma cacao L. crops in Colombia
Thesis
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Rodriguez M, Restrepo S, Gonzalez A.
Comparison between genome scale metabolic models of Phytophthora infestans and Phytophthora betacei: A key tool for understanding phytopathogens metabolic behaviors. "V Congreso Colombiano de Biología y Computacional y Bioinformatica octubre 2019
Event
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Chaves S, Rodriguez M, Mideros M, Lucca F, Ñustez C, Restrepo S. (2019)
Determining Whether Geographic Origin and Potato Genotypes Shape the Population Structure of Phytophthora infestans in the Central Region of Colombia
Phytopathology (ISSN 0031-949X)
Article
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Rodriguez M, Cepeda M, Anzola J, Restrepo S, Fernandez M, Gonzalez A.
Dissecting cocoa beans fermentation through metagenomics analysis."V Congreso Colombiano de Biología y Computacional y Bioinformatica Ibague Colombia Octubre 6-9 2019
Event
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Bernal X, Rojas B, Pinto MA, Mendoza A, Herrera-Montes A, Franco A, Ceron-Souza I, Paz A, Vergara D, Barragan L, Salazar C, Bohorquez M, Guarnizo C, Sanchez A, Olaya-Castro A, Urbina-Cardona N, Guayasamin J, Mora-Kepfer Uy F, Lamadrid F, Franco B, Muñoz MM, Rincon-Diaz M, Sanchez M, Betancourth C, Tarvin R, Marquez R, Lopez-Aguirre C, Ron SR, Ramirez S, Paez-Vacas M, Gaitan-Espitia JD, Navarrete-Mendez M, Vianna J, Varela-Jaramillo A, Sanchez-Martinez P, Caminer M, Garcia C, Kuprewic E, Gomez V, Chacon-Vargas K, Trillo A, Ramirez V, Buenaventura E, Monmany-Garzia AC, Carnaval AC, Dick C, Andrade-Nuñez M, Carvajal J, Pinto D, Camargo-Sanabria AA, Lips K, Motta D, Canedo C, Diaz J, Navarro-Suarez AM, Corredor K, Roa-Varon A, Flechas S, Martinez-lanfranco J, Chiarioni M, Caldwell M, Ballestas O, Mejia C, Chaverri G, Rossi A, Bonaccorso E, Pimiento C, Guerrero R, Warkentin K, Montoya C, Alvarez S, Gonzalez-Duran G, Anganoy-Criollo M, Martinez-Habibe MC, Ramirez JP, Burrowes P, Catenazzi A, Riveros A, Targino M, Velez A, Vargas O, Zapata F, Spengler C, Ceron K, Segovia C, Silva-Velasco M, Ochoa-Herrera V, Medina I, Narins P, Saccol SDA, Godinho MBD, Velasquez B, Velasco J, Lomascolo S, Hoke K, Zeidemann V, Almeida-Santos P, Ferraro D, Araujo-Vieira K, Borges da Rocha S, Torres-Jimenez M, Cadena C, Garcia-Collevatti R, Vasconcellos M, Recart W, Aide T, Bacon C, Jeckel A, Diele-Viegas L, Calijorne A, Santos DL, Cholak LR, Graboski-Mendes R, Silva FM, Guedes T, Lopez-Perilla YR, Fusinatto LA, Terra JD, Rodriguez-Brenes S, Narvaez AE, Zina J, Calderon-Espinosa M, Pardo-diaz C, Abadie M, Maldonado-Chaparro A, Cespedes L, Montesinos R, Fenker J, Brunes TO, Silva A, Goyes-Vallejos J, Rodrigues APVC, Friol NR, Herrera-alvarez S, De Souza E, Araujo OGS, Citeli NQK, Ruggeri J, Fierro-Calderon E, Acevedo-Charry O, Barato P, Campos M, Mazzini F, Beltran I, Meneses M, Jerez A, Clavijo A, Neira-Jimenez C, Dantas G, Nascimento LB, Caballero S, Henao-Sepulveda C, Wolff M, Barnabe P, Quiñones S, Bressan RF, Gomez-Montoya N, Gomez C, Colon-Pineiro Z, Esquivel-Dobles C, Bloch NI, Stynoski J, Arango D, Gonzalez T, Moreno F, Taylor R, Lawrence JP, Briscoe ADM, Ortiz-Barrientos D, Salerno PE, Restrepo S, Pasukonis A, Pacheco-damasceno R, Dalton MC, Proehl H, Valdez-Ward E, Rodriguez SA, Marquez M, Bonaparte E, Molina J, Brown J, Yeager J, Kikuchi D, Ringler M, Hernandez-Duran L, Schulte LM, Vaira M, Pereyra L, Astudillo D, Salica M, Varga S, Eguren A, Grattarola F, Bernal M, Gaston M, Ortega J, Burdfield-Steel E, Valencia L, Ringler E, Rada M, Melendez-Ackerman E, Botero CA, Estrada S, Orizaola G, Pinto BJ, Gonzalez-Bellido P, Hunter KL, Rueda-Solano L. A., Gordon S, Guerra MA, Albo MJ, Vega-frutis R, Blundo C, Castaneda-Gomez L, Donnelly M, Escobar BDC, Moreno M, Crawford AJ, Jiggins C, Roessler D, Bravo L, Sarmiento C, Munoz KA, Galeano SP, Castañeda M, Caro C, Zalamea P, Arias M, Zank C, Suarez-Mayorga AM, Colombo P, Cuervo A, Coriolano IR, De Melo LSO, Buitrago A, Elias M, Gonzalez M, Aldana A, Gubert C, Parra JL, Contador T, Coelho L, Trillo M, Bordin K, Zulian V, Moreno R, Loretto MC, Medina C, Lyra ML, Pulido-Santacruz P, Rosser N, Waldron T, Moreno C, Pizano Camila, Hoedl W, Fratani J, Duport A, Grosso J, Vera MF, Adarve I. (2019)
Empowering Latina scientists
Science (ISSN 0036-8075)
Article
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Sastoque A, Ehemann K, Triana S, Fernandez M, Gonzalez A, Restrepo S, Celis Ramírez AM. (2019)
Evaluation of new therapeutic candidates for the treatment of Malassezia pachydermatis
9th Trends in Medical Mycology Held
Inproceeding
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Gomez F, Soto J, Restrepo S, Bernal A, Lopez L, Lopez C. (2019)
Gene co-expression network for Xanthomonas-challenged cassava reveals key regulatory elements of immunity processes
European Journal of Plant Pathology (ISSN 0929-1873)
Article
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Castro J, Valdes I, Gonzalez-Garcia L, Danies G, Cañas S, Winck F, Ñustez C, Restrepo S, Riaño D. (2019)
Gene regulatory networks on transfer entropy (GRNTE): a novel approach to reconstruct gene regulatory interactions applied to a case study for the plant pathogen Phytophthora infestans.
Theoretical Biology and Medical Modelling (ISSN 1742-4682)
Article
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Rache L .(2019). Genetic Diversity of Xanthomonas axonopodis pv. manihotis (Xam) Populations.
Genetic Diversity of Xanthomonas axonopodis pv. manihotis (Xam) Populations
Thesis
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Gil J .(2019). Genomic variability of Phytophthora palmivora isolates from different oil palm cultivation regions in Colombia.
Genomic variability of Phytophthora palmivora isolates from different oil palm cultivation regions in Colombia
Thesis
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Vargas N, Goncalves S, Franco A, Restrepo S, Pringle A. (2019)
In Colombia the Eurasian fungus Amanita muscaria is expanding its range into native, tropical Quercus humboldtii forests
Mycologia (ISSN 0027-5514)
Article
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Buitrago H, Pineros M, Espinosa D, Restrepo S, Cardona J, Alvarez O, Fernandez M, Gonzalez A. (2019)
Multiscale design of a dairy beverage model composed of Candida utilis single cell protein supplemented with oleic acid
Journal of Dairy Science (ISSN 0022-0302)
Article
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Acosta J, Restrepo S, Henao J, Lopez L. (2019)
Multivariate method for inferential identification of differentially expressed genes in gene expression experiments
Journal of Computational Biology (ISSN 1066-5277)
Article
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Bernal A, Cardenas M, Snoeijenbos M, Guevara-Suarez M, Gutierrez C .(2019). Phytobiomes, The Reason Why Microbiologists and Botanists Should Work Together.
Phytobiomes, The Reason Why Microbiologists and Botanists Should Work Together
Thesis
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Snoeijenbos M, Cardenas M, Guevara-Suarez M, Bernal A, Jiménez P, Restrepo S. (2019)
Phytobiomes, the Reason Why Microbiologists and Botanists Should Work Together
Annual Plant Reviews online (ISSN 2639-3832)
Article
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Garavito M.F, Narvaez H, Pulido D, Loffler M, Judelson H, Restrepo S, Zimmermann B.H. (2019)
Phytophthora infestans Dihydroorotate Dehydrogenase Is a Potential Target for Chemical Control - A Comparison With the Enzyme From Solanum tuberosum
Frontiers in Microbiology (ISSN 1664-302X)
Article
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Suarez L, Tafur A, Restrepo S, Fernandez M, Gonzalez A.
Prediction of a shorter metabolic pathway to produce naringenin in Escherichia coli through in silico modeling. "V Congreso Colombiano de Biología y Computacional y Bioinformatica Ibague Colombia Octubre 6-9 2019"
Event
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Lopez G, Yate H, Ramos F, Mónica P. Cala, Restrepo S, Baena S. (2019)
Production of Polyunsaturated Fatty Acids and Lipids from Autotrophic, Mixotrophic and Heterotrophic cultivation of Galdieria sp. strain USBA-GBX-832
SCIENTIFIC REPORTS (ISSN 2045-2322)
Article
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Dangles O, Restrepo S, Montufar R. (2019)
Sowing the seeds for interdisciplinary plant research and development in the Tropical Andes
Plants, People, Planet (ISSN 2572-2611)
Article
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Mantilla M, Ariza G, Cabrera C, Restrepo S, Celis Ramírez AM. (2019)
Studying the unknown: implementation of two recognized protocols to characterize lipid droplets in Malassezia pachydermatis
9th Trends in Medical Mycology Held
Inproceeding
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Celis Ramírez AM, Cardona J, Restrepo S, Gonzalez A, Wosten H, Hans de Cock. (2018)
Lipidómica: una nueva estrategia para resolver especies crípticas en el complejo Malassezia furfur
Infectio  (ISSN 0123-9392)
Article
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Botero D, Valdes I, Rodriguez M, Henao D, Danies G, Gonzalez A, Restrepo S. (2018)
A Genome-Scale Metabolic Reconstruction of Phytophthora infestans With the Integration of Transcriptional Data Reveals the Key Metabolic Patterns Involved in the Interaction of Its Host
Frontiers in Genetics (ISSN 1664-8021)
Article
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Triviño N .(2018). Abundance and activity of soil ammonia oxidizing microorganisms in Colombian crops of economic importance..
Abundance and activity of soil ammonia oxidizing microorganisms in Colombian crops of economic importance.
Thesis
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Cordoba A, Danies G, Restrepo S. (2018)
Adaptation of the causal agent of late blight, Phytophthora infestans, to climate change - Conferencia: International Congress of Plant Pathology (ICPP)
Phytopathology (ISSN 0031-949X)
Article
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Cordoba A .(2018). Adaptation of the causal agent of potato late blight disease, Phytophthora infestans, to climate change.
Adaptation of the causal agent of potato late blight disease, Phytophthora infestans, to climate change
Thesis
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Bello N, Pastrana H, Garavito M.F, Avila A, Celis Ramírez AM, Restrepo S, Muñoz A, Hurtado J. (2018)
Antibacterial Activities of Azole Complexes Combined with Silver Nanoparticles
Molecules (ISSN 1420-3049)
Article
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Guayazan N .(2018). Bioinformatic pipeline for phenotype-genotype association analyses with limited genotypic data: Phytophthora infestans and its resistance to mefenoxam case study..
Bioinformatic pipeline for phenotype-genotype association analyses with limited genotypic data: Phytophthora infestans and its resistance to mefenoxam case study.
Thesis
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Bautista D .(2018). Caracterización de la respuesta de Solanum betaceum frente a Phytophthora betacei mediante el ensamblaje de su transcriptoma.
Caracterización de la respuesta de Solanum betaceum frente a Phytophthora betacei mediante el ensamblaje de su transcriptoma
Thesis
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Guayazan N .(2018). Characterization of the infection cycle of Phytophthora betacei during disease development on tree tomato (Solanum betaceum).
Characterization of the infection cycle of Phytophthora betacei during disease development on tree tomato (Solanum betaceum)
Thesis
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Pardo C, Magain N, Lutzoni F, Goward T, Restrepo S, Miadlikowska J. (2018)
Contrasting Symbiotic Patterns in Two Closely Related Lineages of Trimembered Lichens of the Genus Peltigera
Frontiers in Microbiology (ISSN 1664-302X)
Article
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Pardo C .(2018). Contrasting symbiotic patterns in two closely related lineages of trimembered lichens of the genus Peltigera.
Contrasting symbiotic patterns in two closely related lineages of trimembered lichens of the genus Peltigera
Thesis
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Lopez G, Diaz-cardenas C, Alzate J, Gonzalez-Garcia L, Shapiro N, Woyke T, Kyrpides N, Restrepo S, Baena S. (2018)
Description of Alicyclobacillus montanus sp. nov., a mixotrophic bacterium isolated from acidic hot springs.
International Journal of Systematic and Evolutionary Microbiology (ISSN 1466-5026)
Article
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Rojas P, Pardo C, Calderon C, Vargas N, Cabrera L, Restrepo S, Jiménez P. (2018)
First report of colletotrichum kahawae subsp. Ciggaro causing anthracnose disease on tree tomato in Cundinamarca, Colombia
Plant Disease (ISSN 0191-2917)
Article
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Castillo L, Osorio A, Vargas N, Sanjuan T, Grajales A, Restrepo S. (2018)
Genetic diversity of the entomopathogenic fungus Cordyceps tenuipes in forests and butterfly gardens in Quindío, Colombia
Fungal Biology (ISSN 1878-6146)
Article
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Lucca F, Restrepo S, Acuña I, Zanotta S. (2018)
Genotipificación de poblaciones de Phytophthora en Latino América
RED DE COOPERACION LATINOAMERICANA SOBRE EL ESTUDIO DEL TIZON TARDIO DE LAS SOLANACEAS Tercer Taller I 2018
Inproceeding
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Celis Ramírez AM, Hans de Cock, Triana S, Cardona L, Restrepo S, Gonzalez A, Wosten H. (2018)
Identification and characterization of lipid droplets in Malassezia furfur
Medical Mycology (ISSN 1369-3786)
Article
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Regnier M, Gonzalez J, Danies G, Restrepo S. (2018)
In vitro and in planta assessment of the effect of mefenoxam-acquired resistance on sporulation in isolates of Phytophthora infestans
Phytopathology (ISSN 0031-949X)
Article
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Restrepo S. (2018)
LA AGRICULTURA, COLOMBIA Y LA UNIVERSIDAD DE LOS ANDES
Revista De Ingeniería (ISSN 0121-4993)
Article
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Celis Ramírez AM, Hans de Cock, Triana S, Cardona J, Restrepo S, Gonzalez A, Wosten H.(2018).
Lipidomic analyses of Malassezia reveals the presence of branched fatty acid esters of hydroxy fatty acids (FAHFAs)
Event
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Kante M, Blondin L, Flores C, Rache L, Wonni I, Dagno K, Restrepo S, Bernal A, Koebnik R, Verdier V, Koita O, Verniere C, Szurek B. (2018)
MLVA-based diversity analysis of Xanthomonas axonopodis pv. manihotis (Xam) populations in Mali
Phytopathology (ISSN 0031-949X)
Article
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Botero D .(2018). Molecular Networks of Pathogenicity Control in Xanthomonas phaseoli pv. manihotis.
Molecular Networks of Pathogenicity Control in Xanthomonas phaseoli pv. manihotis
Thesis
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Cabrera L, Rojas S, Pardo C, Mideros M, Danies G, Lopez L, Jiménez P, Restrepo S. (2018)
Most Colletotrichum species associated with tree tomato (Solanum betaceum) and mango (Mangifera indica) crops are not host-specific
Plant Pathology (ISSN 0032-0862)
Article
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Botero D, Alvarado C, Bernal A, Danies G, Restrepo S. (2018)
Network Analyses in Plant Pathogens
Frontiers in Microbiology (ISSN 1664-302X)
Article
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Mideros M, Parra M, Guayazan N, Danies G, Restrepo S. (2018)
Phytophthora betacei and Phytophthora andina: Controversy within the Clade 1c?
Phytopathology (ISSN 0031-949X)
Article
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Mideros M, Turissini D, Guayazan N, Ibarra H, Danies G, Cardenas M, Myers K, Tabima J, Goss E, Bernal A, Lagos L, Grajales A, Gonzalez-Garcia L, Cooke D. E. L., Fry W. E., Grunwald N. J., Matute D, Restrepo S. (2018)
Phytophthora betacei, a new species within Phytophthora clade 1c causing late blight on Solanum betaceum in Colombia.
Persoonia (ISSN 0031-5850)
Article
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Guevara-Suarez M, Cañas S, Restrepo S, Guarro J, Celis Ramírez AM. (2018)
Revelando mecanismos de resistencia a compuesto antifúngicos en "Fusarium-like"
Infectio  (ISSN 0123-9392)
Article
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Parra M, Guayazan N, Danies G, Mideros M, Vargas N, Lagos L, Restrepo S. (2018)
Sensibilidad a fungicidas sistémicos en aislamientos de Phytophthora betacei y P. infestans colectados de tomate de árbol y papa en Colombia
RED DE COOPERACION LATINOAMERICANA SOBRE EL ESTUDIO DEL TIZON TARDIO DE LAS SOLANACEAS Tercer Taller - 2018
Inproceeding
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Medina C, Reyes P, Trujillo C, Gonzalez J, Bejarano D, Montenegro N, Jacobs J, Joe A, Restrepo S, Alfano J, Bernal A. (2018)
The role of type III effectors from Xanthomonas axonopodis pv. manihotis in virulence and suppression of plant immunity
Molecular Plant Pathology (ISSN 1464-6722)
Article
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Ristaino J. B., Restrepo S. (2018)
Track emerging late blight in the US and South America using a disease alert and surveillance systems and population genomics
Phytopathology (ISSN 0031-949X)
Article
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Guevara-Suarez M, Guarro J, Restrepo S, Celis Ramírez AM. (2018)
Two new species within Fusarium solani complex isolated from human nails in Colombia.
Medical Mycology (ISSN 1369-3786)
Article
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Rache L, Bernal A, Restrepo S. (2017)
Cellulase and xylanase activities of Xanthomonas axonopodis pv. manihotis (Xam) strains collected from different regions of Colombia
J Biotechnol Biomater (ISSN 2155-952X)
Article
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Rache L, Bernal A, Restrepo S.
Cellulase and xylanase activities of Xanthomonas axonopodis pv. manihotis (Xam) strains collected from different regions of Colombia
Event
Buitrago F, Casallas R, Hernandez M, Reyes A, Restrepo S, Danies G. (2017)
Changing a Generation’s Way of Thinking: Teaching Computational Thinking Through Programming
Review of Educational Research (ISSN 0034-6543)
Article
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Alvarez M, Alvarez A, Gomez F, Zambrano M, Husserl J, Danies G, Restrepo S, Gonzalez A. (2017)
Compartmentalized metabolic network reconstruction of microbial communities to determine the effect of agricultural intervention on soils
PLoS ONE (ISSN 1932-6203)
Article
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Vargas N, Pardo C, Danies G, Franco A, Jiménez P, Restrepo S, Grajales A. (2017)
Defining the phylogenetic position of amanita species from andean Colombia
Mycologia (ISSN 0027-5514)
Article
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Lopez G, Cañas S, Pinzon A, Vega N, Rodriguez M, Restrepo S, Baena S. (2017)
Description of a new anaerobic thermophilic bacterium, Thermoanaerobacterium butyriciformans sp. nov.
Systematic and Applied Microbiology (ISSN 0723-2020)
Article
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Diaz-cardenas C, Bernal L, Caro A, Lopez G, Alzate J, Gonzalez-Garcia L, Restrepo S, Shapiro N, Woyke T, Kyrpides N, Baena S. (2017)
Draft genome and description of Consotaella salsifontis gen. nov. sp. nov., a halophilic, free-living, nitrogen-fixing alphaproteobacterium isolated from an ancient terrestrial saline spring.
International Journal of Systematic and Evolutionary Microbiology (ISSN 1466-5026)
Article
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Diaz-cardenas C, Lopez G, Gonzalez-Garcia L, Shapiro N, Woyke T, Kyrpides N, Restrepo S, Baena S, Alzate J. (2017)
Draft genome sequence of Dethiosulfovibrio salsuginis DSM 21565T an anaerobic, slightly halophilic bacterium isolated from a Colombian saline spring.
Standards in Genomic Sciences (ISSN 1944-3277)
Article
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Lopez G, Diaz-cardenas C, Shapiro N, Woyke T, Kyrpides N, Alzate J, Gonzalez-Garcia L, Restrepo S, Baena S. (2017)
Draft genome sequence of Pseudomonas extremaustralis strain USBA-GBX 515 isolated from Superparamo soil samples in Colombian Andes.
Standards in Genomic Sciences (ISSN 1944-3277)
Article
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Gonzalez J .(2017). Evaluation of small ncRNAs as a possible epigenetic mechanism mediating the hemibiotrophic transition in the life cycle of Phytophthora infestans.
Evaluation of small ncRNAs as a possible epigenetic mechanism mediating the hemibiotrophic transition in the life cycle of Phytophthora infestans
Thesis
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Castillo L .(2017). Genetic diversity of the entomopathogenic fungus Cordyceps takaomontana in forests and butterfly gardens in Quindío, Colombia..
Genetic diversity of the entomopathogenic fungus Cordyceps takaomontana in forests and butterfly gardens in Quindío, Colombia.
Thesis
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Parra M .(2017). Genetic population structure and fungicide sensitivity of Phytophthora betacei and P. infestans to systemic fungicides in isolates from tree tomato and potato in Colombia.
Genetic population structure and fungicide sensitivity of Phytophthora betacei and P. infestans to systemic fungicides in isolates from tree tomato and potato in Colombia
Thesis
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Vargas N, Chirivi J, Vasco-palacios A, Jiménez P, Restrepo S. (2017)
HONGOS
Recolección de tejidos biológicos para análisis genéticos (ISBN 978-958-5418-17-2)
Inbook
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Celis Ramírez AM, Vos P, Triana S, Medina C, Escobar N, Restrepo S, Wosten H, Hans de Cock. (2017)
Highly efficient transformation system for Malassezia furfur and Malassezia pachydermatis using Agrobacterium tumefaciens-mediated transformation
Journal of Microbiological Methods (ISSN 0167-7012)
Article
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Palma L, Ardila D, Zambrano M, Restrepo S, Gonzalez A. (2017)
In vitro and in silico characterization of metagenomic soil-derived cellulases capable of hydrolyzing oil palm empty fruit bunch
Biotechnology Reports (ISSN 2215-017X)
Article
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Alvarez A, Alvarez M, Restrepo S, Husserl J, Zambrano M, Danies G, Gomez J, Gonzalez A. (2017)
Influence of agricultural activities in the structure and metabolic functionality of paramo soil samples in Colombia studied using a metagenomics analysis in dynamic state
Ecological Modelling (ISSN 0304-3800)
Article
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Figueroa M .(2017). Inhibitory activity and toxicity of Cordyceps nidus lyophilized extracts..
Inhibitory activity and toxicity of Cordyceps nidus lyophilized extracts.
Thesis
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Triana S, Hans de Cock, Ohm R, Danies G, Wosten H, Restrepo S, Gonzalez A, Celis Ramírez AM. (2017)
Lipid metabolic versatility in Malassezia spp. yeasts studied through metabolic modeling
Frontiers in Microbiology (ISSN 1664-302X)
Article
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Celis Ramírez AM, Wosten H, Triana S, Restrepo S, Hans de Cock. (2017)
Malassezia spp. beyond The Mycobiota
SM Dermatology Journal (ISSN 25757792)
Article
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Chirivi J, Danies G, Sierra R, Schauer N, Trenkamp S, Restrepo S, Sanjuan T. (2017)
Metabolomic profile and nucleoside composition of Cordyceps nidus sp. nov. (Cordycipitaceae): A new source of active compounds
PLoS ONE (ISSN 1932-6203)
Article
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Cabrera L .(2017). Most Colletotrichum species associated with tree tomato (Solanum betaceum) and mango (Mangifera indica) crops are not host specific.
Most Colletotrichum species associated with tree tomato (Solanum betaceum) and mango (Mangifera indica) crops are not host specific
Thesis
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Chaves S .(2017). Population Genetic and structure of Phytophthora spp. causing late blight on potato and tree tomato in central and southern Colombia.
Population Genetic and structure of Phytophthora spp. causing late blight on potato and tree tomato in central and southern Colombia
Thesis
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Rodriguez M .(2017). Population genetic structure of Lactifluus deceptivus associated to oak forests (Quercus humboltii) in two regions of Colombia.
Population genetic structure of Lactifluus deceptivus associated to oak forests (Quercus humboltii) in two regions of Colombia
Thesis
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Danies G, Gonzalez-Garcia L, Myers K, Judelson H, Fry W. E., Restrepo S. (2017)
Searching for the genetic basis of phenotypic traits of interest of the causal agent of late blight disease through a genome-wide association study
Phytopathology (ISSN 0031-949X)
Article
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Morales L, Gonzalez-Garcia L, Orozco M, Restrepo S, Vives M. (2017)
The genomic study of an environmental isolate of Scedosporium apiospermum shows its metabolic potential to degrade hydrocarbons.
Standards in Genomic Sciences (ISSN 1944-3277)
Article
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Rivera J .(2017). Validation of the effector profile of Phytophthora betacei.
Validation of the effector profile of Phytophthora betacei
Thesis
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Rache L, Flores C, Lopez C, Szurek B, Verniere C, Koebnik R, Restrepo S, Bernal A. (2016)
A strategy to study population variation of Xanthomonas axonopodis pv. manihotis using a new set of multiple-locus variable number tandem repeats
Phytopathology (ISSN 0031-949X)
Article
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Gonzalez J, Chirivi J, Parra M, Childers R, Restrepo S, Danies G. (2016)
Assessment of acquired resistance of originally sensitive isolates of Phytophthora infestans to the systemic fungicides fluopicolide and propamocarb
Phytopathology (ISSN 0031-949X)
Article
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Gamboa J .(2016). Caracterización del crecimiento de Cordyceps nidus en diferentes medios de cultivo.
Caracterización del crecimiento de Cordyceps nidus en diferentes medios de cultivo
Thesis
Garavito M.F .(2016). Evaluating the pyrimidine metabolism in the plant pathogen Phytophthora infestans as a target to control the late blight disease..
Evaluating the pyrimidine metabolism in the plant pathogen Phytophthora infestans as a target to control the late blight disease.
Thesis
Sierra R, Cañas S, Fabien F, Schwelm A, Fogelqvist J, Dixelius C, Gonzalez-Garcia L, Gile H. G., Slamovits C, Klopp C, Restrepo S, Arzul I, Pawlowski J. (2016)
Evolutionary Origins of Rhizarian Parasites.
Molecular Biology and Evolution (ISSN 0737-4038)
Article
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Restrepo S, Enciso J, Tabima J, Riaño D. (2016)
Evolutionary history of the group formerly known as protists using a phylogenomics approach
Revista de la Academia Colombiana de Ciencias exactas, Físicas y Naturales (ISSN 0370-3908)
Article
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Parra M, Cabrera L, Chirivi J, C. C, Restrepo S, Danies G. (2016)
Fungicide sensitivity of Phytophthora infestans isolates collected in Colombia
Phytopathology (ISSN 0031-949X)
Article
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Guevara-Suarez M, Cano-Lira J, M. C. Cepero de García, Sopo L, De Bedout C, Cano L, Garcia A, Motta A, Amezquita A, Cardenas M, Espinel-Ingroff A, Guarro J, Restrepo S, Celis Ramírez AM. (2016)
Genotyping of Fusarium Isolates from Onychomycoses in Colombia: Detection of Two New Species Within the Fusarium solani Species Complex and In Vitro Antifungal Susceptibility Testing
Mycopathologia (ISSN 0301-486X)
Article
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Jaimes Y, Gonzalez C, Rojas J, Cornejo O, Mideros M, Restrepo S, Cilas C, Furtado E. (2016)
Geographic differentiation and population genetic structure of Moniliophthora roreri in the principal cocoa production areas in colombia
Plant Disease (ISSN 0191-2917)
Article
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Restrepo S, Cabrera L, Pardo C, Rojas S, Danies G, Jiménez P. (2016)
Host specificity of Colletotrichum sp on tree tomato (Solanum betaceum) and mango (Mangifera indica) crops
Phytopathology (ISSN 0031-949X)
Article
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Zarate C, Mideros M, Danies G, Restrepo S. (2016)
Is host specificity influencing the population structure of Phytophthora spp. collected from potato and tree tomato in central and southern Colombia?
Phytopathology (ISSN 0031-949X)
Article
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Chirivi J .(2016). Metabolite profiling of the spider pathogen Cordyceps nidus showing antioxidant properties and antimicrobial activity.
Metabolite profiling of the spider pathogen Cordyceps nidus showing antioxidant properties and antimicrobial activity
Thesis
Castillo K, Bello N, Nuñez-Dallos N, Pastrana H, Celis Ramírez AM, Restrepo S, Hurtado J, Avila A. (2016)
Metal complex derivatives of azole: A study on their synthesis, characterization, and antibacterial and antifungal activities
Journal of the Brazilian Chemical Society (ISSN 0103-5053)
Article
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Ruiz C, Restrepo S, Zambrano M. (2016)
Microbial and functional diversity within the phyllosphere of Espeletia species in an Andean high-mountain ecosystem
Applied and Environmental Microbiology (ISSN 0099-2240)
Article
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Delgado L, Restrepo S, Bustos J, Zambrano M, Anzola J.M.. (2016)
Mycofier: A new machine learning-based classifier for fungal ITS sequences
BMC Research Notes (ISSN 1756-0500)
Article
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Triana S, Gonzalez A, Hans de Cock, Restrepo S, Celis Ramírez AM. (2016)
New therapeutic targets in two species of Malassezia spp discovered by In silico enzyme deletion in their metabolic reconstruction
6th Conference on Physiology of Yeasts and Filamentous Fungi July 11-14, 2016, Lisbon, Portugal
Inproceeding
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Mongui A, Del Portillo P., Restrepo S, Junca H.
Novel transposon that promotes functional dna expression in episomal dnas and method to enhance dna transcription during functional analysis of metagenomic libraries
PATENTS
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Isea R, Mayo R, Restrepo S. (2016)
Reverse Vaccinology in Plasmodium falciparum 3D7
Journal of Immunological Techniques in Infectious Diseases (ISSN 2329-9541)
Article
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Vargas N .(2016). STUDY OF THE GENUS AMANITA AND SOCIAL ASPECTS IN THE CONSERVATION OF MACROFUNGI IN COLOMBIA.
STUDY OF THE GENUS AMANITA AND SOCIAL ASPECTS IN THE CONSERVATION OF MACROFUNGI IN COLOMBIA
Thesis
Pulido D, Garavito M.F, Judelson H, Restrepo S, Zimmermann B.H.(2016).
Solanum tuberosum and Phytophthora infestans dihydroorotate dehydrogenase as an alternative target to control late blight. ICAP 2016, July 6-9, 2016, Granada, Spain, Poster Presentation
Event
Mideros M .(2016). Speciation of the genus Phytophthora: divergence of a recently emerged Phytophthora species attacking Solanum betaceum crops in South America.
Speciation of the genus Phytophthora: divergence of a recently emerged Phytophthora species attacking Solanum betaceum crops in South America
Thesis
Pardo C, Calderon L, Rincon A, Cardenas M, Danies G, Lopez L, Restrepo S, Jiménez P. (2016)
Species from the Colletotrichum acutatum, Colletotrichum boninense and Colletotrichum gloeosporioides species complexes associated with tree tomato and mango crops in Colombia
Plant Pathology (ISSN 0032-0862)
Article
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Prieto K, Garavito M.F, Danies G, Zimmermann B.H, Restrepo S.(2016).
Uracil phosphoribosyltransferase (UPRT) salvages uracil during hyphal growth of Phytophthora infestans, Canadian Society of Microbiologists Annual Conference. (Toronto, Canada, June 12 -15, 2016). Poster
Event
Prieto K .(2016). Uracil phosphoribosyltransferase (UPRT) salvages uracil during hyphal growth of Phytophthora infestans..
Uracil phosphoribosyltransferase (UPRT) salvages uracil during hyphal growth of Phytophthora infestans.
Thesis
Zamora M, Pinzon A, Zambrano M, Restrepo S, Broadbelt L, Moura M, Husserl J, Gonzalez A. (2015)
A comparison between functional frequency and metabolic flows framed by biogeochemical cycles in metagenomes: The case of "El Coquito" hot spring located at Colombia's national Nevados park
Ecological Modelling (ISSN 0304-3800)
Article
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Celis Ramírez AM, Amado Y, Urbina D, Hans de Cock, Restrepo S.(2015).
Analysis of gene expression profiles in M. Furfur using next generetion
Event
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Chirivi J, Restrepo S, Sierra R, Carazzone C, Sanjuan T. (2015)
Antioxidant properties and antimicrobial potential of Cordyceps nidus sp. nov., an analysis from metabolomics
IMMC8 The 8th International Medicinal Mushroom Conference
Inproceeding
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Gonzalez-Garcia L .(2015). Assembly and Annotation of Phytophthora genome: looking for host specificity.
Assembly and Annotation of Phytophthora genome: looking for host specificity
Thesis
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Gonzalez-Garcia L, Riaño D, Restrepo S.(2015).
Assembly and Annotation of Phytophthora spp genomes: Looking insight host specificity
Event
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Hurtado U, Garcia I, Restrepo S, Aristizabal F, Montoya D. (2015)
Assembly and analysis of differential transcriptome responses of Hevea brasiliensis on interaction with Microcyclus ulei
PLoS ONE (ISSN 1932-6203)
Article
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Castillo L, Restrepo S, Sanjuan T.
Assessment of culture media for the conidia production and synnemata formation of the entomopathogenic fungus Isaria tenuipes Peck, 1879
Event
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Alvarez M, Zambrano M, Husserl J, Gomez J, Restrepo S, Gonzalez A. (2015)
COMPARTMENTALIZED METABOLIC NETWORK RECONSTRUCTION TO DETERMINE THE EFFECT OF THE AGRICULTURAL INTERVENTION OF SOILS ECOSYSTEMS FROM A COLOMBIAN NATURAL PARK LOCATED IN THE ANDES MOUNTAINS. 4th Conference (COBRA 2015) September 16-18. Heidelberg, Germany
Other Publication
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Chirivi J, Restrepo S, Sanjuan T, Sierra R.
Chitinase and pectinase activity in Lecanicillium sabanerum (Cordycipitaceae) Asian Mycologycal Congress 7-10 octubre 2015
Event
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Mongui A, Perez F, Yamamoto M, Lozano M, Zambrano M, Del Portillo P., Fernandez C, Restrepo S, Del Portillo H.A., Junca H. (2015)
Development of a genetic tool for functional screening of anti-malarial bioactive extracts in metagenomic libraries
Malaria Journal (ISSN 1475-2875)
Article
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Castillo L, Sanjuan T, Restrepo S.
Differences between closed-controlled versus opened-natural environments in populations of Isaria tenuipes from the Andean region of Quindío, Colombia
Event
Triana S, Gonzalez A, Ohm R, Wosten H, Hans de Cock, Restrepo S, Celis Ramírez AM. (2015)
Draft genome sequence of the animal and human pathogen Malassezia pachydermatis strain CBS 1879
Genome Announcements (ISSN 2169-8287)
Article
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Castillo L .(2015). Efecto del Hongo aracnopatógeno Cordyceps nidus sp. nov. en tarántulas de la Familia Theraphosidae en condiciones de laboratorio.
Efecto del Hongo aracnopatógeno Cordyceps nidus sp. nov. en tarántulas de la Familia Theraphosidae en condiciones de laboratorio
Thesis
Mideros M, Restrepo S.
Especiación en el genero Phytophthora: un caso de estudios en frutales exóticos - tomate de árbol (Solanum betaceum) para Sur América
Event
Ardila D, Palma L, Medina L. M., Zambrano M, Restrepo S, Gonzalez A. (2015)
Estudios de bioprospeccion de celulosas en ambientes extremos colombianos
Aprovechamiento de biomasa lignocelulósica, algunas experiencias de investigación en colombia (ISBN 978-958-725-152-4)
Inbook
Castillo K, Bello N, Hurtado J, Avila A, Pastrana H, Restrepo S, Celis Ramírez AM.(2015).
Evaluación in vitro de la actividad antifúngica y antibacteriana de nuevos derivados azólicos con metales de transición
Event
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Castillo L, Restrepo S, Sanjuan T. (2015)
Evaluation of Culture Media for the Production of Fruit Bodies and Conidia of the Entomopathogenic Fungus Isaria tenuipes Peck
The 8th International Medicinal Mushrooms conference (ISSN 2462-8530)
Article
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Castillo L, Restrepo S, Sanjuan T.
Evaluation of culture media for the production of fruitbody and conidia of the entomopathogenic fungus Cordyceps takaomontana
Event
Chirivi J, Restrepo S, Sierra R, Carazzone C, Sanjuan T.
Evaluation of the antioxidant and antibacterial properties of Cordyceps nidus sp. nov. (Cordycipitaceae). Asian Mycologycal Congress 7-10 octubre 2015
Event
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Triana S, Gonzalez A, Restrepo S, Celis Ramírez AM.(2015).
First metabolic network of the seborrheic dermatitis related yeast Malassezia furfur. 6 Congress of European Microbiologists. 7-11 June 2015 Maastricht, The Netherlands
Event
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Sanjuan T, Franco A, Kepler R, Spatafora J. W., Tabima J, Vasco-palacios A, Restrepo S. (2015)
Five new species of entomopathogenic fungi from the Amazon and evolution of neotropical Ophiocordyceps
Fungal Biology (ISSN 1878-6146)
Article
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Gonzalez-Garcia L .(2015). GENOMIC SIGNATURE OF ADAPTATION IN MAIZE LANDRACES.
GENOMIC SIGNATURE OF ADAPTATION IN MAIZE LANDRACES
Thesis
Danies G, Romero-Navarro J, Gonzalez-Garcia L, Myers K, Bevels E, Bond M, Wu Y, Restrepo S, Fry W. E.. (2015)
Genetic architecture of complex traits of Phytophthora infestans determined through genome-wide association mapping
Phytopathology (ISSN 0031-949X)
Article
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Restrepo S.
Introduction to the workshop
Other
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Chirivi J, Danies G, Restrepo S, Sanjuan T. (2015)
Lecanicillium sabanense sp. Nov. (cordycipitaceae) a new fungal entomopathogen of coccids
Phytotaxa (ISSN 1179-3155)
Article
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Chirivi J, Danies G, Restrepo S, Sanjuan T.
Lecanicillium sabanerum sp. nov. (Cordycipitaceae) a new fungal entomopathogen of coccids
Other
Triana S, Gonzalez J, Hans de Cock, Gonzalez A, Restrepo S, Celis Ramírez AM.(2015).
Metabolic networks of five Malassezia species
Event
Triana S, Gonzalez J, Gonzalez A, Restrepo S, Celis Ramírez AM. (2015)
Metabolic reconstruction of five Malassezia genomes. III Congreso Colombiano de Biología Computacional y Bioinformatica. Medellín 16-18 de septiembre 2015
Other Publication
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Alvarez A, Restrepo S, Zambrano M, Husserl J, Gomez J, Gonzalez A. (2015)
Metagenomic study at dynamic state to analyze the influence of agricultural activities in the structure and metabolic functionality of soil ecosystems at the Parque Nacional de los Nevados in Colombia
Water Science and Technology (ISSN 0273-1223)
Other Publication
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Botero D, Gomez F, Alvarez M, Alvarez A, Alvarado C, Zarate C, Gonzalez A, Restrepo S, Bernal A.
Molecular Pathogenicity Networks in Xanthomonas axonopodis pv. manihotis
Event
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Botero D, Gomez F, Alvarez M, Alvarez A, Gonzalez A, Restrepo S, Bernal A.
Molecular Pathogenicity Networks in Xanthomonas axonopodis pv. manihotis (5th Xanthomonas Genomics Conference)
Event
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Vargas N, Cardenas M, Jiménez P, Noyd R, Restrepo S. (2015)
Mycology Guide: Key Terms and Concepts, Second Edition
Book
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Vargas N, Pardo-diaz C, Goncalves S, Restrepo S, Pringle A.
Origin of Amanita muscaria introduced to Colombia and a range expansion to tropical Quercus humboldtii forests
Event
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Vargas N, Restrepo S, Pardo C.
Phylogeography of Amanita spp., associated to Quercus humboldtii forest in Colombia
Event
Danies G, Antolinez A, Cantillo J, Peña G, Vargas A, Cardenas M, Bernal A, Fry W. E., Restrepo S. (2015)
Physalis peruviana responses to Phytophthora infestans are typical of an incompatible interaction
CANADIAN JOURNAL OF PLANT PATHOLOGY (ISSN 0706-0661)
Article
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Nuñez V, Restrepo S, Alvarez O, Gonzalez A. (2015)
Protein Engineering As a Tool to Improve the Surfactant Activity of OmpA Protein from Escherichia coli
2015 AIChE Annual Meeting
Inproceeding
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Prieto K, Garavito M.F, Vasquez J. J., Zimmermann B.H, Restrepo S. (2015)
Pyrimidine salvage by Uracil Phosphoribosyltransferase (UPRT) of Phytophthora infestans in late blight disease in Solanum tuberosum
Phytopathology (ISSN 0031-949X)
Article
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Triana S, Gonzalez J, Restrepo S, Hans de Cock, Celis Ramírez AM, Gonzalez A.(2015).
Searching Therapeutic Candidates Against the Yeast Malassezia Sp. By a Metabolic Reconstruction, Feasibility Analysis and Proteomics Validation
Event
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Karr J, Williams A, Zucker J, Raue A, Steiert B, Timmer J, Kreutz C, Wilkinson S, Allgood B, Bot B, Hoff B, Kellen M, Covert M, Stolovitzky G, Meyer P, Hu Y, Baron M, Bryson K, Barker B, Bogart E, Wang Y, Chandramohan D, Huang L, Zawack K, Shestov A, Makadia H, Decicco D, Yin A, Wang M, Li S, Swistak M, Cygan M, Kazakiewicz D, Kursa M, Korytkowski P, Plewczynski D, Yang J, Li Y, Tang H, Wang T, Liu Y, Xie Y, Xiao G, Bello J, Botero D, Cañas S, Castro J, Gomez F, Valdes I, Gonzalez L, Bernal A, Pedraza J, Restrepo S, Reyes A. (2015)
Summary of the DREAM8 Parameter Estimation Challenge: Toward Parameter Identification for Whole-Cell Models
PLoS Computational Biology (ISSN 1553-734X)
Article
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Castillo A, Castro J, Restrepo S, Celis Ramírez AM.(2015).
TRANSCRIPTIONAL PROFILE OF FUSARIUM OXYSPORUM AND FUSARIM SOLANI CHALLENGED WITH ANTIFUNGAL COMPOUNDS IN VITRO
Event
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Garavito M.F, Garcia-Bayona L, Vasquez J. J., Bello J, Tenjo F, Loffler M, Judelson H, Restrepo S, Zimmermann B.H.(2015).
Targeting the pyrimidine metabolism in a devastating plant pathogen
Event
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Tenjo F. J., Garavito M.F, Garcia-Bayona L, Restrepo S, Zimmermann B.H.(2015).
Uridine Monophosphate Synthase: Architecture Versatility in the Service of Late Blight Control.
Event
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Castro J, Valdes I, Danies G, Gonzalez-Garcia L, Cañas S, Ñustez C, Restrepo S, Riaño D. (2015)
qRT-PCR as a tool for regulatory network reconstruction in Phytophthora infestans
Phytopathology (ISSN 0031-949X)
Article
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Trujillo C, Ochoa J. C., Mideros M, Restrepo S, López C. E., Bernal A. (2014)
A Complex Population Structure of the Cassava Pathogen Xanthomonas axonopodis pv. manihotis in Recent Years in the Caribbean Region of Colombia
MICROBIAL ECOLOGY (ISSN 0095-3628)
Article
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Danies G, Myers K, Mideros M, Restrepo S, Martin F. N., Cooke D. E. L., Banks J, Ristaino J. B., Seaman A. J., Gugino B. K., Grunwald N. J., Fry W. E..
A novel recombinant population of Phytophthora infestans in northeastern USA
Event
Chirivi J, Restrepo S, Sanjuan T, Sierra R. (2014)
Actividad hidrolítica de cepas nativas colombianas de Evlachovaea sp. y Lecanicillium sabanerum (Cordycipitaceae, Ascomycota)
ACTUALIDADES BIOLOGICAS (ISSN 0304-3584)
Article
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Danies G, Myers K, Mideros M, Restrepo S, Martin F. N., Cooke D. E. L., Smart C, Ristaino J. B., Seaman A. J., Gugino B. K., Grunwald N. J., Fry W. E.. (2014)
An Ephemeral Sexual Population of Phytophthora infestans in the Northeastern United States and Canada
PLoS ONE (ISSN 1932-6203)
Article
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Alvarez M, Alvarez A, Zambrano M, Husserl J, Restrepo S, Gomez J, Gonzalez A, Velasco N. (2014)
Analysis Of The Effect Of Metabolic Network Compartmentalization In Predicting The Behavior Of Microbial Communities. ISCB-Latin American x-Meeting on Bioinformatics with BSB and SoiBio! Octuber 28-30 2014, Belo Horizonte, Brazil
Other Publication
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Alvarez M, Husserl J, Restrepo S, Zambrano M, Velasco N, Gomez J, Gonzalez A. (2014)
Analysis of Metabolic Network to establish microbial community structure
XXVII Congreso Interamericano de Ingenieria Química
Inproceeding
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Zamora M. A., Pinzón A, Zambrano M, Restrepo S, Broadbelt L, Moura M, Gonzalez A. (2014)
Analysis of metabolic functionality and thermodynamic feasibility of a metagenomic sample from “El Coquito” hot spring
Advances in Computational Biology. Proceedings of the 2nd Colombian Congress on Computational Biology and Bioinformatics (CCBCOL) (ISBN 978-3-319-01567-5)
Inbook
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Cristancho M, Botero D, Giraldo W, Tabima J, Riaño D, Escobar C, Rozo Y, Rivera L, Duran A, Restrepo S, Eilam T, Anikster Y, Gaitan A. (2014)
Annotation of a hybrid partial genome of the Coffee Rust (Hemileia vastatrix) contributes to the gene repertoire catalogue of the Pucciniales
Frontiers in Plant Science (ISSN 1664-462X)
Article
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Castillo A, Restrepo S, Cardenas M, Celis Ramírez AM. (2014)
Análisis del perfil transcripcional de Fusarium oxysporum y F. solani frente a compuestos antifúngicos in vitro
ACTUALIDADES BIOLOGICAS (ISSN 0304-3584)
Article
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Cristancho M, Giraldo W, Botero D, Tabima J, Ortiz D, Peralta A, Gaitán A, Restrepo S, Riaño D. (2014)
Application of Genome Studies of Coffee Rust
Advances in Computational Biology. Proceedings of the 2nd Colombian Congress on Computational Biology and Bioinformatics (CCBCOL) (ISBN 978-3-319-01567-5)
Inbook
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Rodriguez M .(2014). Caracterización del tamaño y persistencia anual de los genetos de la especie ectomicorrícica Lactarius deceptivus, asociada a bosques de roble Quercus humboldtii.
Caracterización del tamaño y persistencia anual de los genetos de la especie ectomicorrícica Lactarius deceptivus, asociada a bosques de roble Quercus humboldtii
Thesis
Triana S, Celis Ramírez AM, Gonzalez A, Restrepo S. (2014)
Caracterización enzimática preliminar y purificación parcial de una lipasa extracelular relacionada con la actividad lipolítica de Malassezia furfur con asimilación atípica de Tween 80
ACTUALIDADES BIOLOGICAS (ISSN 0304-3584)
Article
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Prieto K .(2014). Caracterización fenotípica y molecular de aislamientos de Phytophthora infestans obtenidos de cultivos de papa (Solanum tuberosum) en el departamento de Nariño, Colombia..
Caracterización fenotípica y molecular de aislamientos de Phytophthora infestans obtenidos de cultivos de papa (Solanum tuberosum) en el departamento de Nariño, Colombia.
Thesis
Rincon A, Cardenas M, Restrepo S, Jiménez P. (2014)
Colletotrichm species associated with tree tomato and mango in Colombia
Phytopathology (ISSN 0031-949X)
Article
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Lopez I, Reyes A, Restrepo S, Zambrano M, Gonzalez A. (2014)
Computational tool for in silico metagenomic screening of biosurfactants
XXVII Congreso Interamericano de Ingenieria Química.
Inproceeding
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Lopez I, Reyes A, Zambrano M, Gonzalez A, Restrepo S. (2014)
Computational tool for in silico screening of biosurfactants in metagenomic libraries. ISCB-Latin American x-Meeting on Bioinformatics with BSB and SoiBio! Octuber 28-30 2014, Belo Horizonte, Brazil
Other Publication
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Garavito M.F, Garcia-Bayona L, Vasquez J. J., Bello J, Tenjo F, Lozano G, Bernal A, Zimmermann B.H, Restrepo S.(2014).
De novo pyrimidine biosynthesis in the oomycete plant pathogen Phytophthora infestans
Event
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Garcia-Bayona L, Garavito M.F, Lozano G, Vasquez J. J., Myers K, Fry W. E., Bernal A, Zimmermann B.H, Restrepo S. (2014)
De novo pyrimidine biosynthesis in the oomycete plant pathogen Phytophthora infestans
Gene (ISSN 0378-1119)
Article
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Castro J .(2014). Decision making in host pathogen interactions: Exploring Phytophthora infestans regulatory network.
Decision making in host pathogen interactions: Exploring Phytophthora infestans regulatory network
Thesis
Ramos I, Carvajal C, Montaña J, Restrepo S, Rodriguez M, Jiménez P. (2014)
Defense responses induced by acibenzolar-S-methyl in cape gooseberry (Physalis peruviana) against Fusarium oxysporum
Phytopathology (ISSN 0031-949X)
Article
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Vargas N, Grajales A, Franco A, Cardenas M, Jiménez P, Restrepo S.
Defining the molecular phylogenetic position of some Amanita species growing in ectotrophic forests in Colombia
Event
Alvarez A, Gonzalez A, Restrepo S, Husserl J, Zambrano M, Gomez J, Velasco N. (2014)
Dynamic Analysis Of Metabolic Networks As A Tool To Study The Influence Of Metabolism Activities On Biogeochemical Cycles From Different Ecosystems. ISCB-Latin Octuber 28-30 2014, Belo Horizonte, Brazil
Other Publication
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Gomez V, Restrepo S, Jahn A, Miyaki C, Cadena C. (2014)
EVOLUCIÓN DE LA CONDUCTA MIGRATORIA EN Tyrannus savana‚ UN AVE MIGRATORIA PARCIAL
IV CONGRESO COLOMBIANO DE ZOOLOGÍA X CONGRESO LATINOAMERICANO DE HERPETOLOGIA X CONGRESO DE LA SOCIEDAD LATINOAMERICANA DE ESPECIALISTAS EN MAMÍFEROS ACUÁTICOS (SOLAMAC) VII ENCUENTRO COLOMBIANO SOBRE ABEJAS SILVESTRES
Inproceeding
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Mideros M, Restrepo S. (2014)
El devorador de plantas
Hipótesis: Apuntes Científicos Uniandinos (ISSN 1692-729X)
Article
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Sanjuan T, Tabima J, Spatafora J. W., Laessoe T, Restrepo S, Franco A. (2014)
Entomopathogens of Amazonian stick insects and locusts are members of the Beauveria species complex (Cordyceps sensu stricto)
Mycologia (ISSN 0027-5514)
Article
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Castillo K, Restrepo S, Celis Ramírez AM, Hurtado J, Avila A.(2014).
Evaluación de la actividad antifúngica in vitro de derivados triazólicos con metales de transición y nanopartículas de plata
Event
Castillo L .(2014). Evaluación de medios de cultivo para la producción de sinemas y conidios del hongo entomopatógeno Isaria tenuipes Peck.
Evaluación de medios de cultivo para la producción de sinemas y conidios del hongo entomopatógeno Isaria tenuipes Peck
Thesis
Castillo L, Restrepo S, Sanjuan T. (2014)
Evaluación de medios de cultivo para la producción de sinemas y conidios del hongo entomopatógeno Isaria tenuipes Peck
ACTUALIDADES BIOLOGICAS (ISSN 0304-3584)
Article
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Tenjo F, Bello J, Garcia-Bayona L, Garavito M.F, Zimmermann B.H, Restrepo S. (2014)
Evaluación de una posible regulación metabólica en la biosíntesis de pirimidinas en el patosistema de Phytophthora infestans y Solanum tuberosum
ACTUALIDADES BIOLOGICAS (ISSN 0304-3584)
Article
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Tenjo F. J., Bello J, Garcia-Bayona L, Vasquez J. J., Garavito M.F, Bernal A, Zimmermann B.H, Restrepo S.(2014).
Evaluation of a Possible Metabolic Regulation in Pyrimidine Biosynthesis in Phytophthora infestans and Solanum tuberosum: the case of Aspartate Transcarbamoylase and Uridine Monophosphate Synthase
Event
Pardo C, Restrepo S, Vargas N. (2014)
First taxonomic and distribution approach of the lichens from the páramo of the Natural National Park Chingaza, Colombia
ACTUALIDADES BIOLOGICAS (ISSN 0304-3584)
Article
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Mongui A .(2014). GENETIC STRATEGIES FOR IMPROVING FUNCTIONAL EXPRESSION OF METAGENOMIC LIBRARIES AND ITS APPLICATION IN THE ESTABLISHMENT OF A CUSTOMIZED PLATFORM TO SCREEN NOVEL ANTIMALARIAL COMPOUNDS..
GENETIC STRATEGIES FOR IMPROVING FUNCTIONAL EXPRESSION OF METAGENOMIC LIBRARIES AND ITS APPLICATION IN THE ESTABLISHMENT OF A CUSTOMIZED PLATFORM TO SCREEN NOVEL ANTIMALARIAL COMPOUNDS.
Thesis
Enciso J .(2014). IMPORTANCIA DE LA INTROGRESION ADAPTATIVA EN LA COLONIZACION DE NUEVOS NICHOS MIMETICOS EN Heliconius cydno.
IMPORTANCIA DE LA INTROGRESION ADAPTATIVA EN LA COLONIZACION DE NUEVOS NICHOS MIMETICOS EN Heliconius cydno
Thesis
Buitrago F, Restrepo S, Riaño-Pachón D. (2014)
Identification of Transcription Factor Genes and Their Correlation with the High Diversity of Stramenopiles
PLoS ONE (ISSN 1932-6203)
Article
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Valdes I .(2014). Identifying metabolic markers for the hemibiotrophic life style of Phytophthora infestans.
Identifying metabolic markers for the hemibiotrophic life style of Phytophthora infestans
Thesis
Restrepo S, Mideros M. (2014)
Los oomicetes fitopatógenos en Colombia
ACTUALIDADES BIOLOGICAS (ISSN 0304-3584)
Article
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Alvarez A, Restrepo S, Husserl J, Zambrano M, Gomez J, Velasco N, Gonzalez A. (2014)
Metabolic Networks Analysis To Study Biogeochemical Cycles From Ecosystems
XXVII Congreso Interamericano de Ingenieria Química.
Inproceeding
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Ruiz C .(2014). Microbial and Functional Diversity within the Phyllosphere of Espeletia sp. in Andean High Mountain Ecosystems.
Microbial and Functional Diversity within the Phyllosphere of Espeletia sp. in Andean High Mountain Ecosystems
Thesis
Cañas S, Restrepo S, Pedraza J. (2014)
Novel Protocol for Persister Cells Isolation
PLoS ONE (ISSN 1932-6203)
Article
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Sanjuan T, Franco A, Spatafora J. W., Restrepo S. (2014)
Nuevas especies de Ophiocordyceps en el Amazonas, un enfoque filogenético
ACTUALIDADES BIOLOGICAS (ISSN 0304-3584)
Article
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Sanjuan T, Spatafora J. W., Franco A, Restrepo S.
Phylogenetic study of the interaction Cordyceps sensu lato - Insecta in the Northwest Amazon
Event
Vargas N, Gutierrez C, Mesa L, Velasco N, Diaz M, Restrepo S.
Pleurotus ostreatus cultivation as an alternative for rural low-income women in Villa Pinzón (Colombia).
Event
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Trujillo C, Arias N, Poulin L, Medina C, Tapiero A, Restrepo S, Koebnik R, Bernal A. (2014)
Population typing of the causal agent of cassava bacterial blight in the Eastern Plains of Colombia using two types of molecular markers
BMC Microbiology (ISSN 1471-2180)
Article
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Garavito M.F, Vasquez J. J., Bello J, Tenjo F. J., Bernal A, Restrepo S, Zimmermann B.H.(2014).
Pyrimidine salvage pathways: Uracil Phosphoribosyltransferases of Phytophthora infestans and Solanum tuberosum
Event
Celis Ramírez AM, Restrepo S. (2014)
Revisión de los estudios realizados en el género Malassezia, en Colombia
ACTUALIDADES BIOLOGICAS (ISSN 0304-3584)
Article
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Restrepo S, Garavito M.F, Zimmermann B.H.(2014).
Ruta de síntesis de pirimidinas: ¿el talon de Aquiles de los protistas?
Event
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Restrepo S, Tabima J, Mideros M, Grunwald N. J., Matute D. (2014)
Speciation in Fungal and Oomycete Plant Pathogens
Annual Review of Phytopathology (ISSN 0066-4286)
Article
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Mideros M, Cardenas M, Cañas S, Botero D, Gonzalez-Garcia L, Restrepo S.(2014).
Species recognition and evolutionary history of Phytophthora infestans in South America
Event
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Botero D, Restrepo S, Bernal A, Gonzalez A.
THE Xanthomonas axonopodis pv. manihotis PATHOGENESIS UNCOVER BY METABOLIC NETWORKS
Event
Goss E, Tabima J, Cooke D. E. L., Restrepo S, Fry W. E., Forbes G, Fieland V. J., Cardenas M, Grunwald N. J.. (2014)
The Irish potato famine pathogen Phytophthora infestans originated in central Mexico rather than the Andes
Proceedings of the National Academy of Sciences of the United States of America (ISSN 0027-8424)
Article
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Torres G .(2014). Virulencia de aislamientos de Phytophthora infestans sensu lato provenientes de Nariño y de Putumayo, en Solanum betaceum.
Virulencia de aislamientos de Phytophthora infestans sensu lato provenientes de Nariño y de Putumayo, en Solanum betaceum
Thesis
Forbes G, Morales J. G., Restrepo S, Perez W, Gamboa S, Ruiz R, Cedeño L, Fermin G, Andreu A. B., Acuña I, Oliva R. (2013)
Phytophthora infestans and Phytophthora andina on Solanaceous hosts in South America.
Phytophthora: a global perspective. (ISBN 978-1-78064-093-8)
Inbook
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Florez N, Garcia J, Del Portillo P., Restrepo S, Uribe D. (2013)
COMPOSITION AND FUNCTION OF THE MICROBIAL COMMUNITY RELATED WITH THE NITROGEN CYCLING ON THE POTATO RHIZOSPHERE
Acta Biologica Colombiana (ISSN 0120-548X)
Article
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Flechas S, Edgar M. Medina, Crawford AJ, Sarmiento C, Cardenas M, Amezquita A, Restrepo S. (2013)
Characterization of the First Batrachochytrium dendrobatidis Isolate from the Colombian Andes, an Amphibian Biodiversity Hotspot
EcoHealth (ISSN 1612-9202)
Article
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Lopez L, Pinzon A, Chavez D, Restrepo S, Riaño D. (2013)
Chromosome 10 in the tomato plant carries clusters of genes responsible for field resistance/defence to Phytophthora infestans
Genomics (ISSN 0888-7543)
Article
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Bello J, Tenjo F. J., Garcia-Bayona L, Vasquez J. J., Bernal A, Zimmermann B.H, Restrepo S, Garavito M.F.(2013).
Cloning and expression of the pyrimidine enzymes aspartate transcarbamoylase and uridine synthase of an oomycete plant pathogen
Event
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Rosenblum E, Timothy Y. James , Zamudio K. R., Poorten T, Ilut D, Rodriguez D, Eastmand J, Katy Richards Hrdlicka, Joneson Suzanne, Thomas S. Jenkinson, Longcore J, Gabriela Parra Olea, Toledo Luís Felipe , Arellano M, Edgar M. Medina, Restrepo S, Flechas S, Berger L, Briggs C, Stajich J. (2013)
Complex history of the amphibian-killing chytrid fungus revealed with genome resequencing data
Proceedings of the National Academy of Sciences of the United States of America (ISSN 0027-8424)
Article
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Guayazan N .(2013). Cuantificación en planta completa de la agresividad de dos aislamientos de Phytophthora obtenidos en Nariño y Putumayo, Colombia, en tomate de árbol (Solanum betaceum) y tomate de mesa (Solanum lycopersicum).
Cuantificación en planta completa de la agresividad de dos aislamientos de Phytophthora obtenidos en Nariño y Putumayo, Colombia, en tomate de árbol (Solanum betaceum) y tomate de mesa (Solanum lycopersicum)
Thesis
del Castillo Munera J., Cardenas M, Pinzon A, Castañeda A, Bernal A, Restrepo S. (2013)
Developing a taxonomic identification system of Phytophthora species based on microsatellites Artículo completo 2013
Revista Iberoamericana de Micologia (ISSN 1130-1406)
Article
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Delgado L .(2013). Development of Mycofier: A new Machine Learning-based classifier for fungal ITS sequences.
Development of Mycofier: A new Machine Learning-based classifier for fungal ITS sequences
Thesis
Perez F .(2013). Development of a novel mid throughput platform for the search of compounds against P. falciparum parasite in metagenomes..
Development of a novel mid throughput platform for the search of compounds against P. falciparum parasite in metagenomes.
Thesis
Restrepo S. (2013)
El futuro de las Ciencias Biológicas
Hipótesis: Apuntes Científicos Uniandinos (ISSN 1692-729X)
Article
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Pinzón A, Restrepo S, Gonzalez A. (2013)
FBA Analysis for the study of plant-pathogen interactions
Encyclopedia of Systems Biology (ISBN 978-1-4419-9864-4)
Inbook
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Vargas N, Sierra R, Restrepo S. (2013)
Fungi associated to oak (Quercus humboldtii) in Colombia: Carbohydrate exploration of edible Ectomycorrhizal and saprotroph species
The 7th International Workshop on Edible Mycorrhizal Mushrooms -IWEMM-7
Inproceeding
Luengas E, Abril A, Guhl A, Restrepo S.
GEOSIMCast Model: An empirical approach in Cundinamarca, Colombia
Event
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Cai G, Restrepo S, Myers K, Zuluaga A, Danies G, Smart C, Fry W. E.. (2013)
Gene profiling in partially resistant and susceptible near-isogenic tomatoes in response to late blight in the field
Molecular Plant Pathology (ISSN 1464-6722)
Article
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Restrepo S, Vargas N.
Genetic diversity of some ectomycorrhizal species associated to fragmented oak forests (Quercus humboldtii) in Colombia
Event
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Arrieta M, Rodriguez L. M., Perez A. L., Poulin L, Diaz A, Arias N, Trujillo C, Restrepo M, Bart R, Boch J, Boureau T, Darrasse A, Perrine D, Dugé de Bernonville T, Fontanilla P, Gagnevin L, Guérin F, Jacques M, Lauber E, Lefeuvre P, Medina C, Edgar M. Medina, Montenegro N, Muñoz A, Noël L. D., Ortiz J. F., Osorio D, Pardo C, Patil P. B., Poussier S, Pruvost O, Robène Soustrade I, Ryan R, Tabima J, Urrego O, Vernière C, Carrere S, Verdier V, Szurek B, Restrepo S, López C. E., Koebnik R, Bernal A. (2013)
Genomic Survey of Pathogenicity Determinants and VNTR Markers in the Cassava Bacterial Pathogen Xanthomonas axonopodis pv. Manihotis Strain CIO151
PLoS ONE (ISSN 1932-6203)
Article
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Cardenas M, Jiménez P, Restrepo S. (2013)
Involvement of the Halliwell-Asada pathway in the photosynthesis shutdown during the potato and Phytophthora infestans compatible interaction.
Phytopathology (ISSN 0031-949X)
Article
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Ardila P .(2013). LAMFU database: a resource to monitoring and managing Phytophthora data.
LAMFU database: a resource to monitoring and managing Phytophthora data
Thesis
Guevara-Suarez M, Restrepo S, Celis Ramírez AM. (2013)
Los hongos como patógenos en humanos
Hipótesis: Apuntes Científicos Uniandinos (ISSN 1692-729X)
Article
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Pinzón A, Gonzalez A, Restrepo S. (2013)
Metagenome, Metabolic Reconstruction and Analysis
Encyclopedia of Systems Biology (ISBN 978-1-4419-9864-4)
Inbook
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Luengas E .(2013). Modeling the correlation between late blight development and climate variables in Cundinamarca, Colombia.
Modeling the correlation between late blight development and climate variables in Cundinamarca, Colombia
Thesis
Gonzalez A, Restrepo S, Pinzon A. (2013)
Optimization Algorithms for Metabolites Production
Encyclopedia of Systems Biology (ISBN 978-1-4419-9864-4)
Inbook
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Cespedes M, Cardenas M, Vargas A, Rojas A, Morales J. B. , Jiménez P, Bernal A, Restrepo S. (2013)
Physiological and molecular characterization of Phytophthora infestans isolates from the Central Colombian Andean Region
Revista Iberoamericana de Micologia (ISSN 1130-1406)
Article
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Botero D, Restrepo S, Bernal A.
Reconstrucción Metabólica de Xanthomonas axonopodis pv. manihotis
Event
Amado Y, Patiño A, M. C. Cepero de García, Tabima J, Motta A, Cardenas M, Bernal A, Restrepo S, Celis Ramírez AM. (2013)
Seborrheic dermatitis: predisposing factors and ITS2 secondary structure for Malassezia phylogenic analysis
Medical Mycology (ISSN 1369-3786)
Article
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Cañas S, Restrepo S, Pedraza J.
Synthetic biology approach for bacterial GMOs population control; Bacterial “Alarm Clock” based on Toxin-Antitoxin (TA) stimuli-dependent differential induction
Event
Castiblanco L, Gil J, Rojas A, Osorio D, Gutiérrez S, Muñoz A, Perez A. L., Koebnik R, Szurek B, López C, Restrepo S, Verdier V, Bernal A. (2013)
TALE1 from Xanthomonas axonopodis pv. manihotis acts as a transcriptional activator in plant cells and is important for pathogenicity in cassava plants
Molecular Plant Pathology (ISSN 1464-6722)
Article
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M. C. Cepero de García, Restrepo S, Franco A, Cardenas M, Vargas N. (2012)
Biología de Hongos
Book
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Amado Y, Patiño A, M. C. Cepero de García, Tabima J, Motta A, Cardenas M, Bernal A, Restrepo S, Celis A. (2012)
Caracterización de aislamientos de Malassezia spp. a partir de individuos con dermatitis seborreica
VIII Encuentro Nacional de Investigación en Enfermedades Infecciosas
Inproceeding
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Cabezas L, Calderon L, Medina L. M., Bahamon I, Cardenas M, Bernal A, Gonzalez A, Restrepo S. (2012)
Characterization of cellulases of fungal endophytes isolated from Espeletia spp.
Journal of Microbiology (ISSN 1225-8873)
Article
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Bello J, Tenjo F. J., Vasquez J. J., Garavito M.F, Garcia-Bayona L, Bernal A, Restrepo S, Zimmermann B.H.(2012).
Cloning and Expression of the pyrimidine enzymes uridine monophosphate synthetase (UMP) and aspartate carbamoyltransferase (ATC) of an Oomycete
Event
Trujillo C, Medina C, Restrepo S, López C. E., Bernal A.
Comparison of diversity and population structure of Xanthomonas axonopodis pv. manihotis between two cassava growing regions in Colombia
Event
Botero D, Giraldo W, Gaitán A, Cristancho M, Riaño D, Restrepo S. (2012)
Data Mining of the Coffee Rust Genome (Poster)
ISCB-Latinamrica-2012
Inproceeding
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Cardenas M, Tabima J, Fry W. E., Grunwald N. J., Bernal A, Restrepo S. (2012)
Defining species boundaries in the genus Phytophthora: the case of Phytophthora andina A response to Phytophthora andina sp nov., a newly identified heterothallic pathogen of solanaceous hosts in the Andean highlands' (Oliva et al., 2010)
Plant Pathology (ISSN 0032-0862)
Article
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Osorio D, Rodriguez L. M., Perez A. L., Trujillo C, Lopez C, Koebnik R, Szurek B, Restrepo S, Bernal A.
Determination of the genetic and functional diversity of TAL effectors from Xanthomonas axonopodis pv. manihotis
Event
Guevara-Suarez M, Sopo L, Motta A, Tabima J, M. C. Cepero de García, García A, Bernal A, Restrepo S, Celis A. (2012)
Especies de Fusarium asociadas con onicomicosis en Colombia
VIII Encuentro Nacional de Investigación en Enfermedades Infecciosas
Inproceeding
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L. A. Miles, C. A. Lopera, González S, M. C. Cepero de García, A. E. Franco, Restrepo S. (2012)
Exploring the biocontrol potential of fungal endophytes from an Andean Colombian Paramo ecosystem
BioControl (ISSN 1386-6141)
Article
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Amado Y, Patiño A, M. C. Cepero de García, Tabima J, Motta A, Cardenas M, Bernal A, Restrepo S, Celis A. (2012)
Fusarium species associated with onychomycoses in Colombia.
18th Congress of the International Society for Human and Animal Mycology
Inproceeding
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Rodriguez L. M., Grajales A, Arrieta M, Salazar J. C., Restrepo S, Bernal A. (2012)
Genomes-based phylogeny of the genus Xanthomonas
BMC Microbiology (ISSN 1471-2180)
Article
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Lopez L, Smart C, Fry W. E., Restrepo S. (2012)
Identification of key molecular components of the resistance of cherry tomato against Phytophthora infestans
Acta Biologica Colombiana (ISSN 0120-548X)
Article
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Buitrago F, Restrepo S, Riaño D. (2012)
Identification of transcription factor genes and their correlation with the high diversity of Stramenopiles
ISCB-Latin America 2012
Inproceeding
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Riaño D, Restrepo S, Mueller B, Buitrago F. (2012)
Identification of transcription regulation associated proteins in plants and stramenopiles (Poster)
ISCB-Latin America 2012
Inproceeding
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Ardila D, Palma L, Gonzalez A, Restrepo S, Zambrano M. (2012)
Identification, Characterization and Modeling of Cellulases Active Against Oil Palm Empty Fruit Bunch from Metagenomic Library of Extreme Environments
asm2012 American Society for Microbiology 112th General Meeting
Inproceeding
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Garavito M.F, Garcia-Bayona L, Vasquez J. J., Lozano G, Bernal A, Zimmermann B.H, Restrepo S.(2012).
Metabolismo de pirimidinas en Phytophthora infestans: Búsqueda de estrategias comunes para el control de patógenos Oomycetes como Phytophthora infestans basados en los blancos para el control de parásitos apicomplexa.
Event
Tabima J, Enciso J, Jiménez P, Riaño D, Restrepo S. (2012)
Metagenomic screening for nonculturable oomycetes
Phytopathology (ISSN 0031-949X)
Article
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González A, Cardenas M, Restrepo S. (2012)
Metagenómica Revelación de comunidades microbianas
Hipótesis: Apuntes Científicos Uniandinos (ISSN 1692-729X)
Article
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Calderon L, Tabima J, Restrepo S, Jiménez P. (2012)
Molecular characterization of Colletotrichum species isolated from mango and tree tomato in Cundinamarca and Tolima, Colombia
Phytopathology (ISSN 0031-949X)
Article
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Calderon L, Cardenas M, Restrepo S, Jiménez P. (2012)
Morphological characterization of Colletotrichum species isolated from mango and tree tomato in Cundinamarca and Tolima, Colombia.
Annual Meeting of the American Phytopathological Society
Inproceeding
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Mideros M, Bastidas J, Castillo Y. V., Lagos L, Bernal A, Restrepo S. (2012)
Pathogenicity and aggressiveness of isolates belonging to a new Phytophthora infestans sensu lato population in Colombia
Annual Meeting of the American Phytopathological Society
Inproceeding
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Muñoz A, Guevara-Suarez M, Amado Y, Bocanegra L, Sopo L, Motta A, M. C. Cepero de García, Tabima J, Bernal A, Restrepo S, Celis A. (2012)
Phylogenetic relationship of Malassezia species isolated from seborrheic dermatitis
18th Congress of the International Society for Human and Animal Mycology
Inproceeding
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Cardenas M, Danies G, Tabima J, Bernal A, Restrepo S. (2012)
Phytophthora infestans population structure: A worldwide scale
Acta Biologica Colombiana (ISSN 0120-548X)
Article
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Hurtado V, Trujillo C, Ocampo J, Restrepo S, Bernal A. (2012)
Plausible role of the interactions between the effector HpaF of Xanthomonas axonopodis pv. manihotis and Manihot esculenta proteins in the plant defense system
Inproceeding
Calderon L .(2012). Polyphasic characterization of Colletotrichum sp. Isolates from tree tomato and mango crops in Cundinamarca and Tolima, Colombia..
Polyphasic characterization of Colletotrichum sp. Isolates from tree tomato and mango crops in Cundinamarca and Tolima, Colombia.
Thesis
Vasquez J. J., Garavito M.F, Garcia-Bayona L, Bernal A, Zimmermann B.H, Restrepo S.(2012).
Preliminary biochemical characterization of the pyrimidine salvage pathway enzyme uracil phosphoribosyltransferase in the plant pathogen Phytophthora infestans and its host Solanum tuberosum
Event
Garavito M.F, Garcia-Bayona L, Vasquez J. J., Bello J, Tenjo F. J., Lozano G, Bernal A, Loffler M, Restrepo S, Zimmermann B.H.(2012).
Pyrimidine metabolism in Phytophthora infestans: new control strategies based on targets used to control apicomplexan parasites
Event
Palma L, Medina L. M., Cabezas L, Bahamon I, Gonzalez A, Restrepo S. (2012)
Selection and Characterization of Active Cellulases Against Oil Palm Empty Fruit Bunch from a Colombian Native Endophytes Library
asm2012 American Society for Microbiology 112th General Meeting
Inproceeding
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Flechas S, Sarmiento C, Cardenas M, Edgar M. Medina, Restrepo S, Amezquita A. (2012)
Surviving Chytridiomycosis: Differential Anti-Batrachochytrium dendrobatidis Activity in Bacterial Isolates from Three Lowland Species of Atelopus
PLoS ONE (ISSN 1932-6203)
Article
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Tabima J, Mideros M, Bernal A, Jiménez P, Riaño D, Grunwald N. J., Restrepo S. (2012)
The dynamics of evolution in Phytopththora infestans as told by phylogeographical approaches.
Phytopathology (ISSN 0031-949X)
Article
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Shala A, Restrepo S, Gonzalez A. (2011)
A network model for biofilm development in Escherichia coli K-12
Theoretical Biology and Medical Modelling (ISSN 1742-4682)
Article
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Galvez E, Restrepo S, Jiménez P, Franco L. (2011)
Alternative Oxidase Gene (Aox I): A Good DNA Barcoding Candidate for the Genus Fusarium
Revista Facultad de Ciencias Básicas Universidad Militar Nueva Granada (ISSN 1900-4699)
Article
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Vargas N, Bernal A, Sarria V, Franco A, Restrepo S. (2011)
Amatoxin and phallotoxin composition in species of the genus Amanita in Colombia: A taxonomic perspective
Toxicon : official journal of the International Society on Toxinology (ISSN 0041-0101)
Article
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Villamizar M, Castro H, Mendez D, Rodriguez L. M., Restrepo S. (2011)
Bio-UnaGrid: Easing Bioinformatics Workflow Execution Using LONI Pipeline and a Virtual Desktop Grid
The Third International Conference on Bioinformatics, Biocomputational Systems and Biotechnologies
Inproceeding
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Garavito M.F, Garcia-Bayona L, Vasquez J. J., Lozano G, Bernal A, Loffler M, Zimmermann B.H, Restrepo S.(2011).
Biochemical characterization of recombinant Dihydroorotate dehydrogenase from the plant pathogenic Oomycete Phytophthora infestans
Event
Reyes P, Restrepo S, Bernal A. (2011)
Cassava's immunity suppression mediated by Type III effectors of Xanthomonas axonopodis pv. manihotis
Phytopathology (ISSN 0031-949X)
Article
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Andrade D, Grosch R, Franken P, Rexer K, Kost G, Restrepo S, M. C. Cepero de García, Maximova E. (2011)
Colonization of roots of cultivated Solanum lycopersicum by dark septate and other ascomycetous endophytes
Mycologia (ISSN 0027-5514)
Article
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Garavito M.F, Hortua M, Garcia-Bayona L, Vasquez J. J., Lozano G, Bernal A, Loffler M, Restrepo S, Zimmermann B.H.(2011).
Common strategies for controlling human Apicomplexan parasites and agricultural Oomycete pathogens such as Phytophthora infestans
Event
González A, Plener L, Restrepo S, Boucher C, Genin S. (2011)
Detection and functional characterization of a large genomic deletion resulting in decreased pathogenicity in Ralstonia solanacearum race 3 biovar 2 strains
Environmental Microbiology (ISSN 1462-2912)
Article
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García S, Muñoz J, Torres I, Díez S, Gómez B, Mcewen J, Restrepo S, García A. (2011)
Differential PbP27 expression in the yeast and mycelial forms of the Paracoccidioides brasiliensis species complex
Fungal Genetics and Biology (ISSN 1087-1845)
Article
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Trujillo C, Restrepo S, López C. E., Bernal A. (2011)
Diversity and population dynamics of Xanthomonas axonopodis pv. manihotis in Colombia from 2008 to 2010
Phytopathology (ISSN 0031-949X)
Article
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Andrade D, Grosch R, Restrepo S, Krumbein A, Franken P. (2011)
Effects of dark septate endophytes on tomato plant performance
Mycorrhiza (ISSN 0940-6360)
Article
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Goss E, Cardenas M, Forbes G, Fry W. E., Restrepo S, Grunwald N. J.. (2011)
Emergence of a plant pathogen via hybridization of the Irish famine pathogen, Phytophthora infestans, and an unknown related species
Phytopathology (ISSN 0031-949X)
Article
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Sanjuan T, Franco A, Restrepo S.
Especies de Cordyceps s.l. que atacan ortopteroides en el Noreste Amazónico
Event
Cardenas M, Medina E, Tabima J, Bernal A, Restrepo S, C. A. Lopera. (2011)
First Report of Phytophthora infestans Causing Late Blight on Solanum viarum in Colombia
Plant Disease (ISSN 0191-2917)
Article
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Garcia-Bayona L, Grajales A, Cardenas M, Sierra R, M. C. Cepero de García, Bernal A, Jiménez P, Restrepo S. (2011)
First report of Fusarium oxysporum causin potato dry rot in solanum tuberosum in colombia
New Disease Reports (ISSN 2044-0588)
Article
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Cardenas M, Tabima J, Vargas A, C. A. Lopera, Bernal A, Restrepo S. (2011)
First report of Phytophthora infestans causing Late blight in the wild Solanaceae, Solanum viarum, in Colombia
Plant Disease (ISSN 0191-2917)
Article
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Cardenas M, Grajales A, Sierra R, Rojas A, González A, Vargas A, Marín M, Fermín, Lagos, Grunwald N. J., Bernal A, Salazar C, Restrepo S. (2011)
Genetic diversity of Phytophthora infestans in the Northern Andean region
BMC Genetics (ISSN 1471-2156)
Article
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Mideros Y, Castillo Y, Obando C, Cardenas M, Lagos L, Bernal A, Jiménez P, Restrepo S. (2011)
Genetic structure and patogenicity of Phytophthora infestans sensu lato collected from Solanum betaceum in southwestern Colombia
Phytopathology (ISSN 0031-949X)
Article
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Garcia-Bayona L, Grajales A, Cardenas M, Sierra R, Lozano G, Garavito M.F, M. C. Cepero de García, Bernal A, Jiménez P, Restrepo S. (2011)
Isolation and characterization of two strains of Fusarium oxysporum causing potato dry rot in Solanum tuberosum in Colombia.
Revista Iberoamericana de Micologia (ISSN 1130-1406)
Article
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Olarte X, Fermín, Tabima J, Rojas Y, Tennant P, Fuchs M, Sierra R, Bernal A, Restrepo S. (2011)
Phylogeography and molecular epidemiology of Papaya ringspot virus
Virus Research (ISSN 0168-1702)
Article
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Vasco M, M. C. Cepero de García, Restrepo S, Vives M. (2011)
Recovery of mitosporic fungi actively growing in soils after bacterial bioremediation of oily sludge and their potential for removing recalcitrant hydrocarbons
International Biodeterioration Biodegradation (ISSN 0964-8305)
Article
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Restrepo M, Restrepo S, Bernal A. (2011)
RpfG interaction in Xanthomonas axonopodis pv. manihotis
Phytopathology (ISSN 0031-949X)
Article
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Gonzalez A, Restrepo S, Medina L, Cabezas L, Bahamon I, Palma L. (2011)
Selection and Characterization of Acid-Stable Cellulases Against Pretreated Oil Palm Empty Fruit Bunch From a Colombian Extreme Environment
"AIChE 2011 Anual Meeting October 16-21, 2011 Minneapolis Convention Center – Minneapolis, MN
Inproceeding
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Urrea R, Cabezas L, Cardenas M, Restrepo S, Sierra R, Jiménez P. (2011)
Selection of antagonistic bacteria isolated from the Physalis peruviana rhizosphere against Fusarium oxysporum
Journal of Applied Microbiology (ISSN 1365-2672)
Article
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Pinzon A, Rodriguez L. M., Gonzalez A, Bernal A, Restrepo S, Gonzalez A. (2011)
Targeted metabolic reconstruction: a novel approach for the characterization of plant-pathogen interactions
Briefings in Bioinformatics (ISSN 1467-5463)
Article
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Goss E, Cardenas M, Myers K, Forbes G, Fry W. E., Restrepo S, Grunwald N. J.. (2011)
The Plant Pathogen Phytophthora andina Emerged via Hybridization of an Unknown Phytophthora Species and the Irish Potato Famine Pathogen, P. infestans
PLoS ONE (ISSN 1932-6203)
Article
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Hernández M, Valenzuela E, Reguero M, Restrepo S, Pulido I, Santofimio D, Ramirez M, Quintero L, Mantilla J. (2011)
The genomic identification of Colombian Acinetobacter baumanii clinical isolates by RFLP-PCR analysis of the 16S-23S rRNA gene spacer region
Revista Colombiana de Biotecnología (ISSN 0123-3475)
Article
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Delgado M, Restrepo S, Jaramillo C, Escobar N, Rojas D, Celis A. (2011)
Tipificación de especies de cándida de importancia clínica mediante pcr-rflps
Memorias XV Congreso API 2011 y XV Congreso Panamericano de Infectología (ISBN 978-9974-8194-4-3)
Inproceeding
Vasquez J. J., Garavito M.F, Garcia-Bayona L, Bernal A, Zimmermann B.H, Restrepo S.(2011).
Uracil Phosphoribosyltransferase inhibition as a complementary target for Phytophthora infestans control
Event
Patiño A, Amado Y, M. C. Cepero de García, Chaves D, Tabima J, Motta A, Cardenas M, Bernal A, Restrepo S, Celis Ramírez AM. (2011)
Virulence Gene Expression in Malassezia spp from Individuals with Seborrheic Dermatitis
Journal of Investigative Dermatology (ISSN 0022-202X)
Article
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Arrieta M, Rodriguez L. M., Restrepo S, Koebnik R, Bernal A. (2010)
A bioinformatic study of pathogenicity factors in Xanthomonas axonopodis pv. manihotis
Phytopathology (ISSN 0031-949X)
Article
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Gorrón E, Rodríguez F, Bernal D, Rodriguez L. M., Bernal A, Restrepo S, Tohme J. (2010)
A new method for designing degenerate primers and its use in the identification of sequences in Brachiaria showing similarity to apomixis-associated genes
Bioinformatics (ISSN 1367-4803)
Article
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Méndez M, Restrepo S, Rodriguez L. M., Pérez I, Mendoza J, Martínez A, Sierra R, Rey G. (2010)
An RNAi in silico approach to find an optimal shRNA cocktail against HIV-1
Virology Journal (ISSN 1743-422X)
Article
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Botero D, Escobar C, Rozo Y, Rivera L, Cano M, Giraldo W, Pinzn A, Villamizar M, Rodrguez L, Castro H, Restrepo S, Gaitn A, Marco C. (2010)
Anotación Preliminar del Genoma de la Roya del Café
Revista de la Asociacion Colombiana de Ciencias Biológicas (ISSN 0120-4173)
Article
Chaves D, Sandoval A, Rodrguez L, Garca J, Restrepo S, Zambrano M. (2010)
Análisis comparativo de seis genomas del complejo Mycobacterium tuberculosis
Biomedica (ISSN 0120-4157)
Article
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Bernal A, Restrepo S. (2010)
Bacterial Phylogenomics Revisited: A Case study for the Xanthomonas genus
Inproceeding
Antolinez A, Danies G, Peña A, Vargas A, Bernal A, Restrepo S. (2010)
Biochemical and microscopical study of Phytophthora infestans process of infection on Physalis peruviana
Phytopathology (ISSN 0031-949X)
Article
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Chaves D, Sandoval A, Rodríguez L, Restrepo S, Zambrano M, García J. (2010)
Comparative analysis of six Mycobacterium tuberculosis complex genomes
Biomedica (ISSN 0120-4157)
Article
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Del J, Bernal A, Restrepo S. (2010)
Developing a taxonomic identification system based on microsatellites of Phytophthora species
Phytopathology (ISSN 0031-949X)
Article
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Garavito M.F, Garcia-Bayona L, Lozano G, Bernal A, Zimmermann B.H, Restrepo S.(2010).
Dihydroorotate dehydrogenase from the phytopathogenic Oomycete Phytophthora infestans as a novel target for crop control.
Event
Sierra R, Rodriguez L. M., Chaves D, Pinzon A, Grajales A, Rojas A, Mutis G, Cardenas M, Burbano D, Jiménez P, Bernal A, Restrepo S. (2010)
Discovery of Phytophthora infestans Genes Expressed in Planta through Mining of cDNA Libraries
PLoS ONE (ISSN 1932-6203)
Article
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Villamizar M, Castro H, Escobar C, Rivera L, Botero D, Rozo Y, Rodrguez L, Varzea V, Marco C, Restrepo S.
Draft Genome Sequence of the Coffe Rust (Hemileia vastatrix) Development of Molecular Markers for Diversity Studies of the Pathogen
Event
Urrea R, Cabezas L, Restrepo S, Jiménez P. (2010)
Evaluation of rhizobacterial strains as Fusarium oxysporum biological control agents
Phytopathology (ISSN 0031-949X)
Article
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Garavito M.F, Garcia-Bayona L, Lozano G, Bernal A, Zimmermann B.H, Restrepo S. (2010)
Expression and homology modeling of Dihydroorotate dehydrogenase from the phytopathogenic Oomycete Phytophthora infestans
Phytopathology (ISSN 0031-949X)
Article
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Socha C, Restrepo S, Jiménez P, Calderon L. (2010)
Genus Alternaria species as pathogens of Vaccinium meridionale in Colombia
Phytopathology (ISSN 0031-949X)
Article
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Montenegro N, Alvarez A, Restrepo S, Bernal A. (2010)
Identification and characterization of genes involved in the type VI secretion system in Xanthomonas axonopodis pv. manihotis
Phytopathology (ISSN 0031-949X)
Article
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Vasco M, M. C. Cepero de García, Restrepo S, Vives M. (2010)
Isolation of fungi actively growing in soils after bacterial bioremediation of oily sludges, and their role on the removal of recalcitrant fractions in microcosms assays.
II Congreso de la Sociedad Latinoamericana de Biotecnología Ambiental y Algal
Inproceeding
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Cespedes L, Cardenas M, Vargas A, Bernal A, Restrepo S. (2010)
Molecular and morphological characterization of a Phytophthora infestans population in the Colombian Andean region
Phytopathology (ISSN 0031-949X)
Article
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Trujillo C, Restrepo S, López C. E., Esquivel J, Bernal A. (2010)
Molecular diversity and population dynamics of Xanthomonas axonopodis pv. manihotis in the Caribbean region of Colombia
Phytopathology (ISSN 0031-949X)
Article
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Garcia-Bayona L, Garavito M.F, Bernal A, Zimmermann B.H, Restrepo S.(2010).
Orotate phosphoribosyl transferase and orotidine-5-monophosphate decarboxylase as targets for control of Phytophthora infestans.
Event
Danies G, Vargas A, Antolinez A, Peña A, Bernal A, Restrepo S. (2010)
Physalis peruviana natural reservoir for Phytophthora infestans in the field
Phytopathology (ISSN 0031-949X)
Article
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Cardenas M, Cespedes L, Bernal A, Restrepo S. (2010)
Phytophthora infestans oospores: Production and viability in Colombia
Phytopathology (ISSN 0031-949X)
Article
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Gonzalez A, Jimenez I, Rodriguez M, Restrepo S, Gomez J. (2009)
Biocombustible de segunda generación y biodiesel: una mirada a la contribución de la Universidad de los Andes
Revista De Ingeniería (ISSN 0121-4993)
Article
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Moreno C, Castillo F, González A, Bernal D, Jaimes Y, Chaparro M, Restrepo S, Rodríguez F, Cotes A. (2009)
Biological and molecular characterization of the response of tomato plants treated with Trichoderma koningiopsis
Physiological and Molecular Plant Pathology (ISSN 0885-5765)
Article
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Quesada L, Cespedes L, Carreño N, González A, Rojas A, Vargas A, Zuluaga A, Myers K, Fry W. E., Jiménez P, Bernal A, Restrepo S. (2009)
Characterization of Phytophthora infestans Populations in Colombia: First Report of the A2 Mating Type
Phytopathology (ISSN 0031-949X)
Article
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Lozano G, Restrepo S, Zimmermann B.H. (2009)
Clonación, expresión y caracterización bioinformática de la enzima orotato fosforibosiltransferasa (OPRTasa) de Toxoplasma gondii
Biomedica (ISSN 0120-4157)
Article
Buitrago F, Sierra R, Grajales A, Jiménez P, Bernal A, Restrepo S, Rodriguez L. M.. (2009)
Comparative study of Chalcone synthase promoters across plant families
Revista Colombiana de Biotecnología (ISSN 0123-3475)
Article
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Restrepo S, Pinzon A, Rodriguez L. M., Sierra R, Grajales A, Bernal A, Barreto E, Moreno P, Zambrano M, Cristancho M, Gonzalez A, Castro H. (2009)
Computational Biology in Colombia
PLoS Computational Biology (ISSN 1553-734X)
Article
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Pinzon A, Barreto E, Bernal A, Achenie L, Gonzalez A, Isea R, Restrepo S. (2009)
Computational models in plant-pathogen interactions: the case of Phytophthora infestans
Theoretical Biology and Medical Modelling (ISSN 1742-4682)
Article
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Garavito M.F, Garcia-Bayona L, Restrepo S, Zimmermann B.H. (2009)
Estrategias comunes para controlar patógenos Oomicetes como Phytophthora infestans basados en el modelo Apicomplexa Toxoplasma gondii
Biomedica (ISSN 0120-4157)
Article
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Buitrago F, Sierra R, Grajales A, Rodriguez L, Jiménez P, Bernal A, Restrepo S. (2009)
Estudio comparativo de promotores de la Chalcón Sintasa en diferentes familias de plantas
Revista Colombiana de Biotecnología (ISSN 0123-3475)
Article
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Restrepo S, Guhl F, Ramrez J, Umezawa E. (2009)
Evaluación y comparación del diagnóstico de la enfermedad de Chagas en adultos en fase crónica mediante métodos molecualres y serológicos
XIII Congreso Colombiano de Parasitología y Medicina Tropical (ISBN 0120-4157)
Inproceeding
Ramirez J, Guhl F, Umezawa E, Morillo C, Rosas J, Marín J, Restrepo S. (2009)
Evaluation of Adult Chronic Chagas' Heart Disease Diagnosis by Molecular and Serological Methods
Journal of Clinical Microbiology (ISSN 0095-1137)
Article
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Garavito M.F, Garcia-Bayona L, Zimmermann B.H, Restrepo S. (2009)
First approach to the characterization of de novo pyrimidine biosyntheis pathway in Phytophthora infestans as a target for pathogen control
Phytopathology (ISSN 0031-949X)
Article
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Restrepo S. (2009)
Fitopatología molecular: llevando el laboratorio al campo
XXI Congreso Venezolano de Fitopatología
Inproceeding
Castro N, Casas C, Sopo L, Rojas A, Del Portillo P., M. C. Cepero de García, Restrepo S. (2009)
Fusarium species detected in onychomycosis in Colombia
Mycoses (ISSN 0933-7407)
Article
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Haas B, Restrepo S, et al. (2009)
Genome sequence and analysis of the Irish potato famine pathogen Phytophthora infestans
Nature (ISSN 0028-0836)
Article
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Daniel B, Harold C, Michael P, Miguel R, Restrepo S. (2009)
Grid-enabled HMMER (G-HMMER): A Uniandes contribution to the biology community
2nd EELA-2 Conference
Inproceeding
Sandoval A, Cubillos A, Reyes A, Chaves D, García J, Restrepo S, Del Portillo P., Zambrano M. (2009)
Herramientas genómicas y bioinformáticas aplicadas al estudio de la tuberculosis.
Biomedica (ISSN 0120-4157)
Article
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Bernal A, Restrepo S. (2009)
Identification of pathogenic effectors in Xanthomonas axonopodis pv. manihotis using a genetic screen.
XIV International Congress on Molecular Plant-Microbe Interactions
Inproceeding
Rojas J, Cruz C, Mikan, Villalba G, M. C. Cepero de García, Restrepo S. (2009)
Isoenzyme characterization of proteases and amylases and partial purification of proteases from filamentous fungi causing biodeterioration of industrial paper
International Biodeterioration Biodegradation (ISSN 0964-8305)
Article
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Garcia-Bayona L, Grajales A, Sierra R, Cardenas M, Avila L, M. C. Cepero de García, Restrepo S, Bernal A. (2009)
Isolation and characterization of Fusarium oxysporum causing potato dry rot in Solanum tuberosum in Colombia - año 2009
Phytopathology (ISSN 0031-949X)
Article
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Gonzalez A, Castro H, Villamizar M, Cuervo N, Lozano G, Restrepo S, Orduz S. (2009)
Mesoscale Modeling of the Bacillus thuringiensis Sporulation Network Based on Stochastic Kinetics and Its Application for in Silico Scale-down
HiBi09 - High Performance Computational Systems Biology
Inproceeding
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Cuervo N, Lozano G, Mario V, Harold C, Orduz S, Andrs G, Restrepo S. (2009)
Modelamiento a mesoescala de la red de esporulación de Bacillus thuringiensis usando cinética estocástica y su aplicación para scale down in silico
IV Simposio sobre Biofábricas "Los Grupos de Investigación en Biotecnología y la Formación de nvestigadores"
Inproceeding
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Trujillo C, Jarma A, López C. E., Restrepo S, Bernal A. (2009)
Molecular diversity of Xanthomonas axonopodis pv. manihotis in three different agroecological regions in the Caribbean region of Colombia
Phytopathology (ISSN 0031-949X)
Article
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Prada H, Avila L, Sierra R, Bernal A, Restrepo S. (2009)
Morphological and molecular characterization of the antagonistic interaction between the endophyte Diaporthe sp isolated from frailejon (Espeletia sp.) and the plant pathogen Phytophthora infestans
Revista Iberoamericana de Micologia (ISSN 1130-1406)
Article
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González A, Sierra R, Cardenas M, Grajales A, Restrepo S, M. C. Cepero de García, Celis Ramírez AM. (2009)
Physiological and Molecular Characterization of Atypical Isolates of Malassezia furfur
Journal of Clinical Microbiology (ISSN 0095-1137)
Article
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Galvez E, Franco L, Restrepo S, Jiménez P. (2009)
Search of a "DNA barcode" for identification of species of the genus Fusarium
Phytopathology (ISSN 0031-949X)
Article
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Sierra R, Cardenas M, Grajales A, Rodriguez L. M., Bernal A, Restrepo S. (2009)
Using bioinformatics in the characterization of novel putative virulence determinants of Phytophthora infestans expressed in planta
Phytopathology (ISSN 0031-949X)
Article
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Rodriguez M, Jimenez I, Restrepo S, Gomez J. (2008)
Biocombustibles de segunda generación y biodiesel: una mirada a la contribución de la Universidad de los Andes
Revista De Ingeniería (ISSN 0121-4993)
Article
Vasco M, Vives M, Restrepo S. (2008)
Bioprospection of hyphomycetes with potential for hydrocarbon bioremediation
International Biodeterioration Biodegradation (ISSN 0964-8305)
Article
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Vasco M, Vives M, Restrepo S. (2008)
Bioprospection of hyphomycetes with potential for hydrocarbon bioremediation. International biodeterioration & biodegradation
International Biodeterioration Biodegradation (ISSN 0964-8305)
Article
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Rocha P, Restrepo S, Sierra R, M. C. Cepero de García, Rojas A. (2008)
Ensayos preliminares de la estrategia metagenómica para la posible identificación de agentes asociados a la pudrición del cogollo
Palmas (ISSN 0123-8353)
Article
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C. A. Lopera, Avila L, Rojas A, Franco A, M. C. Cepero de García, Restrepo S. (2008)
Fungal endophytes from the Colombian Andean Paramo ecosystem inhibit the growth of plant pathogens in vitro
Phytopathology (ISSN 0031-949X)
Article
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Sierra R, Vargas A, Bernal A, Restrepo S. (2008)
Gene expression profiling of the infection of yellow potato (Solanum phureja) by Phytophthora infestans
Phytopathology (ISSN 0031-949X)
Article
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Rocha P, Mutis G, Restrepo S. (2008)
Generación de la plataforma bioinformática para palma de aceite de Cenipalma
Palmas (ISSN 0121-2923)
Article
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Gutiérrez S, Rodriguez L. M., Pardo C, Pinzón D, Morales N, Restrepo S, Bernal A. (2008)
Identification of effector genes in Xanthomonas axonopodis pv. manihotis using bioinformatics and a forward genetics screen
Phytopathology (ISSN 0031-949X)
Article
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Rojas A, Cruz C, Mikan, M. C. Cepero de García, Restrepo S. (2008)
Isoenzymatic characterization of proteases, amylases and partial purification of proteases from filamentous fungi causing biodeterioration of industrial paper
International Biodeterioration Biodegradation (ISSN 0964-8305)
Article
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Castiblanco L, Trujillo C, Alfonso N, López C. E., Szurek B, Verdier V, Restrepo S, Bernal A. (2008)
Molecular characterization of virulence and pathogenicity determinants in Xanthomonas axonopodis pv. manihotis
Phytopathology (ISSN 0031-949X)
Article
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Rojas A, Sierra R, González A, Vargas A, Cardenas M, Fermín, Lagos L, Bernal A, Restrepo S, Salazar C. (2008)
Study of the genetic diversity of Phytophthora infestans isolates from the Northern Andean region using seven genic regions
Phytopathology (ISSN 0031-949X)
Article
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Vargas A, Bernal A, Restrepo S. (2007)
Appearance of the mating type A2 in a population of Phytophthora infestans from six species of the Solanaceae family in the Cundinamarca - Colombia
Phytopathology (ISSN 0031-949X)
Article
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Restrepo S, Vargas A. (2007)
Biotecnología: Herramienta de diagnóstico de enfermedades en plantas
Palmas (ISSN 0121-2923)
Article
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Restrepo S, Jiménez P. (2007)
Briefly revisiting Fusarium oxysporum, taxonomy, biology and disease
Revista Facultad de Ciencias Básicas Universidad Militar Nueva Granada (ISSN 1900-4699)
Article
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Herman M, Restrepo S, Smart C. (2007)
Defense gene expression patterns of three SAR-induced tomato cultivars in the field
Physiological and Molecular Plant Pathology (ISSN 0885-5765)
Article
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Avila L, C. A. Lopera, Restrepo S, M. C. Cepero de García. (2007)
Diversity of a fungal endophyte community isolated from two Espeletia species and its biocontrol potential against plant pathogens
Phytopathology (ISSN 0031-949X)
Article
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Corredor I, M. C. Cepero de García, Restrepo S. (2007)
Evaluación de la susceptibilidad de hongos endófitos aislados de rosa (Rosa hybrida) a fungicidas comerciales
Revista Colombiana de Biotecnología (ISSN 0123-3475)
Article
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Vargas A, Correa A, Lozano D, Bernal A, Restrepo S, Jiménez P, González A. (2007)
First report of late blight caused by Phytophthora infestans on Cape gooseberry (Physalis peruviana) in Colombia.
Plant Disease (ISSN 0191-2917)
Article
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Salgado C, M. C. Cepero de García, Realpe E, Restrepo S. (2007)
Histological analyses of the fungal endophytes in rosa hybrida.
Revista Iberoamericana de Micologia (ISSN 1130-1406)
Article
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Barriga C, Pinzon A, Szurek B, González A, Morales N, Restrepo S, Bernal A, Verdier V. (2007)
Identification of pathogenicity determinants in Xanthomonas axonopodis pv. manihotis using comparative genomic tools
Phytopathology (ISSN 0031-949X)
Article
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Restrepo S. (2007)
Phytophthora infestans (Mont.) de Bary más allá del mito
ACTUALIDADES BIOLOGICAS (ISSN 0304-3584)
Article
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Carreño N, Vargas A, Bernal A, Restrepo S. (2007)
Problemas fitopatológicos en especies de la familia Solanaceae causados por los géneros Phytophthora, Alternaria y Ralstonia en Colombia
Agronomía Colombiana (ISSN 0120-9965)
Article
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Franco L, Restrepo S, Jiménez P. (2007)
Proyecto de codigos de barras en colombia: una posible estrategia para la identificacion taxonomica de hongos fitopatogenos
Revista Facultad de Ciencias Básicas Universidad Militar Nueva Granada (ISSN 1900-4699)
Article
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Restrepo S, Smart C. (2006)
Aplicaciones de los microarreglos a los problemas fitopatológicos.
V Congreso Internacional de Genética y VII Congreso Nacional de Genética
Inproceeding
Cai G, Restrepo S, Myers K, Smart C, Fry W. E.. (2006)
Differential gene expression between near-isogenic tomato genotypes in response to late blight infection in the field
Phytopathology (ISSN 0031-949X)
Article
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Delgado M, Avila J, Molina A, López A, Restrepo S, Gómez M, Montealegre M, Jaramillo C. (2006)
Estandarización de un método de extracción y purificación de Taq DNA polimerasa
Foro de la Facultad de Ciencias
Inproceeding
Restrepo S. (2006)
Genómica de las interacciones planta-patógeno, caso de estudio papa - Phytophthora infestans, realidades y potenciales.
XII Congreso CIB y II Encuentro en salud y biotecnología
Inproceeding
López C. E., Restrepo S, Verdier V. (2006)
Limitaciones de la bacteriosis vascular de yuca: Nuevos avances
Acta Biologica Colombiana (ISSN 0120-548X)
Article
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Tapiero A, Garnica D, Gordillo M, Bernal A, Restrepo S. (2006)
Molecular and pathogenic variability in colombian isolates of Phytophthora sojae
Phytopathology (ISSN 0031-949X)
Article
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Garnica D, Pinzon A, Quesada L, Bernal A, Restrepo S, Barreto E. (2006)
Molecular markers a la carte: Exploiting genomic databases for the generation of tools for understanding of Phytophthora spp. populations
Phytopathology (ISSN 0031-949X)
Article
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Medrano M, Restrepo S, Vanegas M. (2006)
Molecular typing of Listeria monocytogenes isolated from clinical and food samples [Tipificación molecular de Listeria monocytogenes aisladas de muestras clínicas y alimentos.]
Biomedica (ISSN 0120-4157)
Article
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Pinzon A, Garnica D, Quesada L, Bernal A, Barreto E, Grunwald N. J., Restrepo S. (2006)
Survey and analysis of microsatellites from transcript sequences in Phytophthora species: frequency, distribution, and potential as markers for the genus
BMC Genomics (ISSN 1471-2164)
Article
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Sierra R, González A, Rocha P, Restrepo S. (2006)
Xylella fastidiosa no se detecta en tejidos de palma de aceite (Elaeis guineensis jacq.) afectada por la marchitez letal.
Palmas (ISSN 0123-8353)
Article
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López C. E., Soto M, Restrepo S, Piégu B, Cooke R, Delseny M, Tohme J, Verdier V. (2005)
Gene expression profile in response to Xanthomonas axonopodis pv. manihotis infection in cassava using a cDNA microarray
Plant Molecular Biology (ISSN 0167-4412)
Article
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Restrepo S, Cai G, Fry W. E., Smart C. (2005)
Gene expression profiling of the infection of tomato by Phytophthora infestans in the field
Phytopathology (ISSN 0031-949X)
Article
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Restrepo S, Myers K, Del O, Martin G, Hart A, Buell C, Fry W. E., Smart C. (2005)
Gene profiling of a compatible interaction between Phytophthora infestans and Solanum tuberosum suggests a role for carbonic anhydrase
Molecular Plant-Microbe Interactions (ISSN 0894-0282)
Article
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López C. E., Jorge V, Piégu B, Mba C, Cortés D, Restrepo S, Soto M, Laudié M, Berger C, Cooke R, Delseny M, Tohme J, Verdier V. (2004)
A unigene catalogue of 5700 expressed genes in cassava
Plant Molecular Biology (ISSN 0167-4412)
Article
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Anderson J, Delseny M, Fregene M, Jorge V, Mba C, Restrepo S, López C. E., Soto M, Piégu B, Verdier V, Cooke R, Tohme J, Horvath D. (2004)
An EST resource for cassava and other species of Euphorbiaceae
Plant Molecular Biology (ISSN 0167-4412)
Article
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Restrepo S, Velez C, Duque M, Verdier V. (2004)
Genetic structure and population dynamics of Xanthomonas axonopodis pv. manihotis in Colombia from 1995 to 1999
Applied and Environmental Microbiology (ISSN 0099-2240)
Article
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Santaella M, Suárez E, González C, Mosquera G, Restrepo S, López C. E., Tohme J, Badillo, Verdier V. (2004)
Identification of genes in cassava that are differentially expressed during infection with Xanthomonas axonopodis pv. manihotis
Molecular Plant Pathology (ISSN 1464-6722)
Article
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Verdier V, Restrepo S, Mosquera G, Jorge V, López C. E.. (2004)
Recent progress in the characterization of molecular determinants in the Xanthomonas axonopodis pv. manihotis-cassava interaction
Plant Molecular Biology (ISSN 0167-4412)
Article
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Ronning C, Stegalkina S, Ascenzi R, Bougri O, Hart A, Restrepo S, et al. (2003)
Comparative analyses of potato expressed sequence tag libraries
Plant Physiology (ISSN 0032-0889)
Article
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Smart C, Myers K, Restrepo S, Martin G, Fry W. E.. (2003)
Partial resistance of tomato to Phytophthora infestans is not dependent upon ethylene, jasmonic acid, or salicylic acid signaling pathways
Molecular Plant-Microbe Interactions (ISSN 0894-0282)
Article
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González C, Restrepo S, Tohme J, Verdier V. (2002)
Characterization of pathogenic and nonpathogenic strains of Xanthomonas axonopodis pv. manihotis by PCR-based DNA fingerprinting techniques
FEMS Microbiology Letters (ISSN 0378-1097)
Article
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Restrepo S, Santaella M, Zuluaga A, Suárez E, González C, Mosquera G, Velez C, Tohme J, Verdier V, López C. E.. (2001)
Cassava bacterial blight: recent advances in the understanding and control of the disease
Cassava Biotechnology Network
Inproceeding
Restrepo S, Duque M, Verdier V. (2000)
Characterization of pathotypes among isolates of Xanthomonas axonopodis pv. manihotis in Colombia
Plant Pathology (ISSN 0032-0862)
Article
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Restrepo S, Verdier V, Velez C. (2000)
Measuring the genetic diversity of Xanthomonas axonopodis pv. manihotis within different fields in Colombia
Phytopathology (ISSN 0031-949X)
Article
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Restrepo S, Velez C, Verdier V. (2000)
Population dynamics of Xanthomonas axonopodis pv. manihotis populations in Colombia from 1996 to 1999
Phytopathology (ISSN 0031-949X)
Article
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Restrepo S, Duque M, Verdier V. (2000)
Resistance spectrum of selected Manihot esculenta genotypes under field conditions
Field Crops Research (ISSN 0378-4290)
Article
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Sanchez G, Restrepo S, Duque M, Fregene M, Bonierbale M, Verdier V. (1999)
AFLP assessment of genetic variability in cassava accessions (Manihot esculenta) resistant and susceptible to the cassava bacterial blight (CBB)
Genome / National Research Council Canada = Genome / Conseil national de recherches Canada (ISSN 0831-2796)
Article
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Restrepo S, Duque M, Tohme J, Verdier V. (1999)
AFLP fingerprinting: An efficient technique for detecting genetic variation of Xanthomonas axonopodis pv. Manihotis
Microbiology (ISSN 1350-0872)
Article
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Restrepo S, Valle T, Duque M, Verdier V. (1999)
Assessing genetic variability among Brazilian strains of Xanthomonas axonopodis pv. manihotis through restriction fragment length polymorphism and amplified fragment length polymorphism analyses
Canadian Journal of Microbiology (ISSN 0008-4166)
Article
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Restrepo S. (1999)
Characterization of the genetic base of resistance to cassava bacterial blight with amplified fragment length polymorphism
Genome / National Research Council Canada = Genome / Conseil national de recherches Canada (ISSN 0831-2796)
Article
Verdier V, Restrepo S, Mosquera G, Duque M, Gerstl A, Laberry R. (1998)
Genetic and pathogenic variation of Xanthomonas axonopodis pv. manihotis in Venezuela
Plant Pathology (ISSN 0032-0862)
Article
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Verdier V, Restrepo S, Mosquera G, Duque M, Gerstl A, Laberry R. (1998)
The xanthomonas axonopodis pv. manihotis population in Venezuela
Plant Pathology (ISSN 0032-0862)
Article
Restrepo S, Verdier V, Mosquera G, Gerstl A, Laberry R, Valle T, Alvarez E. (1997)
Cassava bacterial blight in South America: pathogenic and genetic characterization of the causal agent and its application to screening methods
AFRICAN JOURNAL OF ROOT AND TUBER CROPS (ISSN 1118-2075)
Article
Verdier V, Restrepo S, Boher B, Nicole M, Geiger J, Alvarez E. (1997)
Cassava bacterial blight: recent achievements in understanding the disease.
AFRICAN JOURNAL OF ROOT AND TUBER CROPS (ISSN 1118-2075)
Article
Restrepo S, Verdier V. (1997)
Geographical differentiation of the population of Xanthomonas axonopodis pv. manihotis in Colombia
Applied and Environmental Microbiology (ISSN 0099-2240)
Article
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Restrepo S, Verdier V. (1997)
Répartition géographique de la bactériose vasculaire du manioc en Colombie et variabilité de l'agent pathogène = Geographical distribution of bacterial wilt of Cassava in Colombia and the Variability of the pathogen= Distribucion geographica de la bactéri
Cahiers de la recherche développement (ISSN 1193-9184)
Article
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Degrees

  • Docteur, Sciences De La Vie Biologie, Diversite Et Adaptation Des Plantes

    Doctoral degree

    Université Paris Vi

    1999

    Francia

    Diplome D'Études Approfondies Phytopathologye

    Master degree

    Université Paris Vi

    1994

    Francia

  • Maitrise De Biologie Cellulaire Mention Genetique

    Master degree

    Université Paris Vi

    1993

    Francia

    Bióloga

    Bachelor degree

    Universidad De Los Andes, Colombia

    1992

    Colombia

Projects

  • 2023
    • Caracterización polifásica de microbioma asociado a diferentes sustratos en Colombia

      Duration: months

      PR.6.2023.10387

      Evaluation of biocompounds production from Colombian microalgae strains under stress conditions.

      Duration: 6 months

      PR.6.2023.10328

      Microalgae are a diverse group of photosynthetic microorganisms that inhabit both marine and freshwater environments (1,2). They offer potential applications in biotechnology, such as the production of biodiesel, wastewater remediation, and their use in food and pharmaceutical products (1,2). This is due to their  efficient oxygen photosynthesis, simple nutritional requirements, and the advantageous characteristics of microbial cell culture, such as rapid growth in liquid culture and the ability to synthesize or secrete various metabolites (1,2). Microalgae biomass possesses a significant chemical composition, including elevated levels of vitamins, proteins, polysaccharides, minerals, enzymes, and fibers (1). This biomass holds the potential to serve as a valuable source of bioactive compounds, such as bioactive peptides, polyphenols, essential amino acids, monounsaturated (MUFA) and polyunsaturated (PUFA) fatty acids, carotenoids, and phycocyanin (1,2).  Colombia, a country with extensive marine and oceanic waters, provides an ideal habitat for these microorganisms (3). Various regions of Colombia have been identified through metagenomics and microbial ecology approaches to have a presence of microalgae (3) @font-face {font-family:Batang; panose-1:2 3 6 0 0 1 1 1 1 1; mso-font-alt:바탕; mso-font-charset:129; mso-generic-font-family:roman; mso-font-pitch:variable; mso-font-signature:-1342176593 1775729915 48 0 524447 0;}@font-face {font-family:"Cambria Math"; panose-1:2 4 5 3 5 4 6 3 2 4; mso-font-charset:0; mso-generic-font-family:roman; mso-font-pitch:variable; mso-font-signature:-536870145 1107305727 0 0 415 0;}@font-face {font-family:"\@Batang"; panose-1:2 3 6 0 0 1 1 1 1 1; mso-font-charset:129; mso-generic-font-family:roman; mso-font-pitch:variable; mso-font-signature:-1342176593 1775729915 48 0 524447 0;}p.MsoNormal, li.MsoNormal, div.MsoNormal {mso-style-unhide:no; mso-style-qformat:yes; mso-style-parent:""; margin:0cm; mso-pagination:widow-orphan; text-autospace:none; font-size:10.0pt; font-family:"Times New Roman",serif; mso-fareast-font-family:"Times New Roman"; mso-ansi-language:ES; mso-fareast-language:ES;}.MsoChpDefault {mso-style-type:export-only; mso-default-props:yes; font-size:10.0pt; mso-ansi-font-size:10.0pt; mso-bidi-font-size:10.0pt; mso-font-kerning:0pt; mso-ligatures:none; mso-ansi-language:ES-CO; mso-fareast-language:ES-CO;}div.WordSection1 {page:WordSection1;}@font-face {font-family:Batang; panose-1:2 3 6 0 0 1 1 1 1 1; mso-font-alt:바탕; mso-font-charset:129; mso-generic-font-family:roman; mso-font-pitch:variable; mso-font-signature:-1342176593 1775729915 48 0 524447 0;}@font-face {font-family:"Cambria Math"; panose-1:2 4 5 3 5 4 6 3 2 4; mso-font-charset:0; mso-generic-font-family:roman; mso-font-pitch:variable; mso-font-signature:-536870145 1107305727 0 0 415 0;}@font-face {font-family:"\@Batang"; panose-1:2 3 6 0 0 1 1 1 1 1; mso-font-charset:129; mso-generic-font-family:roman; mso-font-pitch:variable; mso-font-signature:-1342176593 1775729915 48 0 524447 0;}p.MsoNormal, li.MsoNormal, div.MsoNormal {mso-style-unhide:no; mso-style-qformat:yes; mso-style-parent:""; margin:0cm; mso-pagination:widow-orphan; text-autospace:none; font-size:10.0pt; font-family:"Times New Roman",serif; mso-fareast-font-family:"Times New Roman"; mso-ansi-language:ES; mso-fareast-language:ES;}.MsoChpDefault {mso-style-type:export-only; mso-default-props:yes; font-size:10.0pt; mso-ansi-font-size:10.0pt; mso-bidi-font-size:10.0pt; mso-font-kerning:0pt; mso-ligatures:none; mso-ansi-language:ES-CO; mso-fareast-language:ES-CO;}div.WordSection1 {page:WordSection1;} @font-face {font-family:Batang; panose-1:2 3 6 0 0 1 1 1 1 1; mso-font-alt:바탕; mso-font-charset:129; mso-generic-font-family:roman; mso-font-pitch:variable; mso-font-signature:-1342176593 1775729915 48 0 524447 0;}@font-face {font-family:"Cambria Math"; panose-1:2 4 5 3 5 4 6 3 2 4; mso-font-charset:0; mso-generic-font-family:roman; mso-font-pitch:variable; mso-font-signature:-536870145 1107305727 0 0 415 0;}@font-face {font-family:"\@Batang"; panose-1:2 3 6 0 0 1 1 1 1 1; mso-font-charset:129; mso-generic-font-family:roman; mso-font-pitch:variable; mso-font-signature:-1342176593 1775729915 48 0 524447 0;}p.MsoNormal, li.MsoNormal, div.MsoNormal {mso-style-unhide:no; mso-style-qformat:yes; mso-style-parent:""; margin:0cm; mso-pagination:widow-orphan; text-autospace:none; font-size:10.0pt; font-family:"Times New Roman",serif; mso-fareast-font-family:"Times New Roman"; mso-ansi-language:ES; mso-fareast-language:ES;}.MsoChpDefault {mso-style-type:export-only; mso-default-props:yes; font-size:10.0pt; mso-ansi-font-size:10.0pt; mso-bidi-font-size:10.0pt; mso-font-kerning:0pt; mso-ligatures:none; mso-ansi-language:ES-CO; mso-fareast-language:ES-CO;}div.WordSection1 {page:WordSection1;}

    • Uso de Endófitos Fúngicos de Plantas Angiospermas para Inducir Resistencia a Sequía en Plantas de Cacao

      Duration: 24 months

      PR.6.2023.10427

      Theobroma cacao (L.) conocido comúnmente como cacao corresponde a un árbol frutal de importancia económica y social en Colombia (Rodriguez-Medina et al., 2019). A pesar de esto, la producción de cacao podría reducirse para el 2050 debido al cambio climático, en particular debido a los aumentos de temperatura, salinidad y disminución de precipitación (Garcia Lozano & Moreno Fonseca, 2015). Por lo expuesto, como estrategia para contrarrestar los efectos del cambio climático en los cultivos de cacao se plantea el uso de endófitos de plantas angiospermas de bosques secos. Lo anterior, dado que las plantas angiospermas de bosque secos se han reportado como hospederos de endófitos que podrían generar resistencia a salinidad y sequía en cultivos (Sampangi-Ramaiah et al., 2020). @font-face {font-family:"Cambria Math"; panose-1:2 4 5 3 5 4 6 3 2 4; mso-font-charset:0; mso-generic-font-family:roman; mso-font-pitch:variable; mso-font-signature:-536870145 1107305727 0 0 415 0;}@font-face {font-family:Calibri; panose-1:2 15 5 2 2 2 4 3 2 4; mso-font-charset:0; mso-generic-font-family:swiss; mso-font-pitch:variable; mso-font-signature:-536859905 -1073732485 9 0 511 0;}p.MsoNormal, li.MsoNormal, div.MsoNormal {mso-style-unhide:no; mso-style-qformat:yes; mso-style-parent:""; margin-top:0cm; margin-right:0cm; margin-bottom:8.0pt; margin-left:0cm; line-height:107%; mso-pagination:widow-orphan; font-size:11.0pt; font-family:"Calibri",sans-serif; mso-ascii-font-family:Calibri; mso-ascii-theme-font:minor-latin; mso-fareast-font-family:Calibri; mso-fareast-theme-font:minor-latin; mso-hansi-font-family:Calibri; mso-hansi-theme-font:minor-latin; mso-bidi-font-family:"Times New Roman"; mso-bidi-theme-font:minor-bidi; mso-ansi-language:ES-CO;}.MsoChpDefault {mso-style-type:export-only; mso-default-props:yes; font-size:11.0pt; mso-ansi-font-size:11.0pt; mso-bidi-font-size:11.0pt; font-family:"Calibri",sans-serif; mso-ascii-font-family:Calibri; mso-ascii-theme-font:minor-latin; mso-fareast-font-family:Calibri; mso-fareast-theme-font:minor-latin; mso-hansi-font-family:Calibri; mso-hansi-theme-font:minor-latin; mso-bidi-font-family:"Times New Roman"; mso-bidi-theme-font:minor-bidi; mso-font-kerning:0pt; mso-ligatures:none; mso-ansi-language:EN-GB;}.MsoPapDefault {mso-style-type:export-only; margin-bottom:8.0pt; line-height:107%;}div.WordSection1 {page:WordSection1;}

  • 2020
    • Portable, Low-cost Hardware for De-centralized COVID-19 Diagnostics

      Duration: 12 months

      PR.2.2020.7907

      We propose to develop and validate the molecular tools and hardware needed for the decentralized, high capacity diagnostic and serological testing needed to respond to the COVID-19 crisis.With the peak infection hopefully past, attention is turning to the tools that will be needed to re-start our economy and for life to return to normal. Two capabilities are key for this to happen: 1) De-centralized diagnostic testing for SARS-CoV-2 to prevent a resurgence of infection and 2) Serological testing to test population antibody-levels and allow for strategic use of precious, future vaccine stocks. There has yet to be a means to de-centralize this capacity for the widespread surveillance needed. Here we propose to adapt our low-cost portable plate reader for high capacity and distributed testing with our rapid molecular test (RT-LAMP) for the SARS-CoV-2 genome (15 min) and our related ELISA-based antibody test.

      Biodiversidad asociada al modelo agroalimentario sostenible de la piangua

      Duration: 36 months

      PR.6.2020.7868

      Caracterizar la diversidad genética, el genoma y las comunidades microbianas asociadas a Anadara tuberculosa, en dos localidades del Pacífico.

    • Exploración del microbioma de Bactris gasipaes (chontaduro) en Ecuador y Colombia.

      Duration: 34 months

      PR.6.2020.7930

      Hoy en día gracias a las nuevas tecnologías de secuenciación se han podido realizar estudios que permiten establecer la composición de la comunidad microbiana asociada a las plantas o lo que se conoce como microbioma sin el sesgo que implica el uso de los métodos dependientes de cultivo. En los últimos años, el estudio de los fitobiomas ha cobrado particular interés debido a la importancia que tienen las interacciones de las plantas con otros organismos y el ambiente. Estas interacciones moldean el comportamiento de las plantas en diferentes situaciones de estrés biótico o abiótico y podrían afectar, positiva o negativamente, el “fitness” de las plantas. Las comunidades microbianas representan una fuente única de oportunidades para mejorar la calidad de los cultivos, así como su rentabilidad y pueden constituirse en alternativas biológicas al uso de productos químicos (Snoeijenbos et al., 2019). Además, el estudio del microbioma permite conocer la diversidad microbiológica asociada a nuestros ecosistemas y establecer una línea base que permita desarrollar investigaciones encaminadas a esclarecer las interacciones comunidades-plantas y su posible bioprospección. Además, la manipulación del microbioma vegetal ha revelado entre otros, tener potencial de reducir la incidencia de enfermedades de las plantas y aumentar la producción agrícola, lo que resulta en prácticas agrícolas más sostenibles.

  • 2019
    • Búsqueda de metabolitos secundarios con posible actividad antifúngica, producidos por hongos endófitos del frailejón plateado (Espeletia argentea) en el páramo de Cruz verde, Cundinamarca.

      Duration: 31 months

      PR.6.2019.6387

      El desarrollo de nuevas medicinas y compuestos capaces de mejorar la calidad de vida humana es una necesidad constante. A pesar de la disponibilidad de nuevas tecnologías en los campos de la química, la bioinformática y la biología molecular que permiten sintetizar y diseñar moléculas, 6 de cada 20 de las medicinas más comúnmente prescritas son de origen fúngico. Los hongos endófitos representan una fuente de screening inteligente, y en las últimas dos décadas se han descubierto varios compuestos bioactivos con actividad antimicrobiana, citotóxica e insecticida a partir de estos, además, son muy pocos los estudios que se han hecho sobre endófitos en Colombia.  Este trabajo busca explorar y evaluar la capacidad de producción de metabolitos secundarios con actividad antimicrobiana de hongos endófitos aislados de Espeletia argentea frente a hongos de importancia clínica y en el campo de la fitopatología y caracterizar químicamente los metabolitos secundarios producidos por estos, hasta nivel de familias químicas. Se espera observar una actividad antimicrobiana significativa en algunos de estos hongos endófitos frente a los hongos patógenos seleccionados.

      Caracterización de la población de Oomycetes asociados a cultivos de Theobroma cacao en Colombia

      Duration: 30 months

      PR.6.2019.6287

      Para un cultivo de importancia económica como el árbol de cacao, es importante conocer y comprender la identidad, el origen y la diversidad de sus patógenos, lo cual permitiría formular estrategias para el manejo y control eficiente (McDonald & Linde, 2002; McDonald, 2004) . De hecho, la enfermedad y su persistencia están fuertemente relacionadas con la evolución constante de los patógenos y su adaptación a los cambios ambientales (McDonald & Linde, 2002; McDonald, 2004). En las áreas cultivadas de cacao en Colombia no se han realizado estudios adecuados para evaluar la diversidad de la población de Phytophthora spp. asociada a los cultivos, ni la relación entre la diversidad y las características fisiológicas como patogenicidad, solo se sabe que una especie, Phytophthora palmivora, se ha relacionado con T. cacao (Ramírez, 2016). Es por eso que el objetivo de este proyecto es evaluar las especies de oomicetos asociadas a cultivos de T. cacao en Colombia, su estructura poblacional y su patogenicidad. Para esto, es necesario hacer una identificación taxonómica usando caracteres morfológicos y moleculares. También se debe realizar una caracterización fenotípica que evalúe la patogenicidad de los aislamientos. Además para conocer la estructura poblacional se debe hacer una caracterización molecular completa de los aislamientos de Phytophthora spp. para lo cual se puede usar la tecnología DArTseq (Jaccoud et al., 2001), que es ideal para este estudio porque no requiere información de secuencia previa, brinda mayor rendimiento, más eficiencia y mayor precisión en comparación con otros métodos de genotipado

    • Caracterización de las interacciones de especies de solanáceas y sus microorganismos asociados.

      Duration: months

      PR.6.2019.6767

  • 2018
    • Streptomyces patógenas en cultivos de papa en Cundinamarca

      Duration: 24 months

      PR.6.2018.5707

      Este proyecto busca aislar y evaluar cepas patógenas de Streptomyces spp. de cultivos de papa de Cundinamarca

      Expedición Cacao Colombia-BIO

      Duration: 66 months

      PR.6.2018.5127

      Resumen:Colombia es considerada el último bastión en la búsqueda del origen de la diversidad y variabilidad de las especies del género Theobroma y Herrania. Desafortunadamente, la información disponible sobre este grupo de alta importancia económica, agrícola y cultural es limitada. En esta expedición estamos colaborando científicos de entidades gubernamentales nacionales, regionales y universidades con el fin de determinar la diversidad de Theobroma cacao y sus especies hermanas en estado silvestre en zonas endémicas poco exploradas y su asociación con plantas, insectos, microorganismos rizosféricos y fitopatógenos. Para maximizar el impacto de las colecciones y disminuir costos, hemos seleccionado dos zonas prioritarias basadas en criterios de modelación, previas expediciones y colecciones históricas. La zona de recolección será el Choco Biogeográfico conocido como centro de producción de nuevas especies. El valor agregado de las colecciones que esperamos esta también relacionado a que estos sitios de colecta escogidos han sido zonas de conflicto en los últimos 50 años lo cual no había permitido acceder a estas localidades de única diversidad inexplorada. Planteamiento del problema El recurso biológico y genético alrededor de las especies de Theobroma cacao y sus parientes silvestres es de alto valor para el desarrollo del cultivo en Colombia y el mundo. Este grupo de especies pueden presentar variaciones genéticas que confieren resistencia a enfermedades, resiliencia ante el cambio climático, menor tasa de absorción de metales pesados en particular cadmio, o nuevos perfiles de sabores y aromas distintos a los caracterizados actualmente. Estas características tienen un valor económico importante para la industria del chocolate y, por lo tanto, la generación de conocimiento acerca del material genético nativo de Theobroma y sus parientes taxonómicos. Por estas razones, la realización de expediciones a nuevas áreas que han tenido pocas colecciones biológicas alrededor del cultivo del cacao son de mucho valor para el futuro mantenimiento del recurso genético y diversidad biológica del Cacao en Colombia. Marco conceptual: Theobroma cacao L. es una especie neotropical que se extiende desde la cuenca del Amazonas hasta el sur de México dentro de un rango entre las latitudes 20 °N y 20 °S. Esta especie pertenece al género Theobroma que consta de 22 especies, las cuales tienen también una distribución neotropical. Por otro lado, el género Herrania considerado como el grupo hermano del género Theobroma, está constituido por 17 especies también neotropicales. El cacao ha sido utilizado como fuente de alimentación por antiguas culturas precolombinas. Sin embargo, se cree que sólo una pequeña fracción del total de la diversidad existente se diseminó desde las áreas consideradas como de distribución primaria, lo que se traduce en que los actuales materiales de cacao que se utilizan poseen una estrecha base genética. Por consiguiente, existe una gran ventana de oportunidad de lograr encontrar y colectar materiales del género Theobroma y especies hermanas con mayor diversidad y variabilidad genética en diferentes regiones del país. El cacao es vulnerable al ataque de diferentes fitopatógenos, dentro de los cuales se destacan para Colombia los hongos Moniliophthora roreri, Moniliophthora perniciosa y oomycetes como Phytophthora sp. Estos patógenos causan enfermedades que causan pérdidas considerables en la producción de cacao y esto se debe en parte al desconocimiento de la diversidad genética de las poblaciones de patógenos presentes en el país, lo que a su vez dificulta la implementación de estrategias de control. Por esta razón, se propone caracterizar la incidencia natural de estos microorganismos patógenos en las regiones definidas en esta expedición. El estudio de las comunidades de microorganismos asociados a los distintos tejidos de las plantas ha ganado un enorme interés en el área agrícola debido a la creciente evidencia de que estas comunidades pueden afectar el desarrollo, productividad y resiliencia de los cultivos. Estas comunidades juegan en muchos casos roles importantes, por ejemplo, en la protección de los tejidos frente a patógenos, la fijación y translocación de nutrientes, resistencia a la sequía y resistencia a la herbivoría. Esto se debe a que el hábitat asociado a la planta es un ambiente dinámico, el cual afecta la estructura y composición de especies microbianas que colonizan raíces, tallos, ramas, frutos y hojas. Objetivo general El objetivo de la expedición Cacao Colombia-BIO es determinar la diversidad de Theobroma, Herrania y especies relacionadas en estado silvestre en zonas endémicas poco exploradas y su asociación con plantas, artrópodofauna, microbiota y fitopatógenos.  

    • Identificación, valoración y conservación de diversidad microbiana de ambientes extremos y endémicos seleccionados de Colombia

      Duration: 24 months

      PR.6.2018.5187

      Existe hoy en día un creciente interés por conocer y valorar la biodiversidad en nuestro país. Esta propuesta parte de trabajos anteriores de sus integrantes y busca profundizar en la exploración de la diversidad microbiana en Colombia. Para esto se harán muestreos de suelos y aguas en ambientes endémicos y estratégicos, como los páramos, para recuperar microorganismos pertenecientes a grupos taxonómicos de interés por su biología, su diversidad funcional y su potencial biotecnológico. Se desarrollarán estrategias para recuperar microorganismos extremófilos de manantiales termales y salinos, hongos y actinomicetes. También se hará caracterización de la diversidadmicrobiana mediante secuenciación metagenómica de las comunidades en los sitios muestreados, por ensayos fenotípicos y moleculares de los aislamientos obtenidos y mediante secuenciación genómica de aislamientos seleccionados. En estos estudios se implementarán flujos bioinformáticos, algunos ya utilizados y otros enfocados a profundizar sobre el papel e importancia de estas comunidades en sus ecosistemas naturales.  Aunque las técnicas moleculares, como el análisis de genes conservados y la secuenciación metagenómica, han brindado información relevante sobre los microorganismos en un ecosistema, es muy difícil comprender y aprovechar nuevas rutas funcionales exclusivamente a partir de datos de secuenciación. Para entender aspectos de fisiología microbiana, propiedades celulares y el potencial biotecnológico es esencial contar con representantes cultivados. Sin embargo, todavía el número de especies aisladas con las cuales realizar estos trabajos en el laboratorio es muy bajo. Los microorganismos aislados se depositarán en la colección de la Pontificia Universidad Javeriana, junto con metadatos sobre sitios y características, siguiendo pautas internacionales y con ayuda de asesores expertos en estos temas. Se propone el entrenamiento de curadores de la colección de la Javeriana y un taller para fortalecer la capacidad nacional. Se espera desarrollar nuevas técnicas para aislamientos y ampliar la representatividad de grupos taxonómicos estratégicos por su diversidad metabólica, como insumo para exploraciones y estudios futuros, siempre de la mano de desarrollos en flujos bioinformáticos que permiten estudios a gran escala y en su contexto ambiental y ecológico, y de genes y genomas microbianos.  En este proyecto se busca identificar, valorar y conservar biodiversidad microbiana de ambientes extremos y endémicos de Colombia. Teniendo en cuenta la acumulación de resultados previos de los investigadores proponentes, surgen diversas preguntas de investigación: ¿Se pueden desarrollar metodologías novedosas para aumentar el aislamiento de microorganismos (Bacterias, arqueas y hongos) con bajarepresentatividad en las colecciones microbianas de los grupos de investigación? ¿Cuál es la versatilidad metabólica de microorganismos aislados de ambientes extremos y/o endémicos de Colombia?Para responder a estas preguntas se propone lo siguiente: 1) realizar muestreos en ambientes extremos, como manantiales termales y salinos, y en lugares endémicos y estratégicos para el país, como los páramos. 2) desarrollar estrategias para recuperar grupos de microorganismos poco representados en las colecciones de las instituciones participantes y que resultan de interés por su potencial ecológico, biotecnológico y diversidad funcional. Esto incluye implementación de diferentes estrategias de cultivo para recuperar extremófilos de manantiales termales y salinos y microorganismos de páramo, con un enfoque hacia recuperación de hongos, actinobacterias ymicroorganismos halotolerantes, halófilos y termófilos. 3) Caracterizar la diversidad microbiana mediante i) secuenciación metagenómica de las comunidades en los sitios muestreados, ii) ensayos fenotípicos y moleculares de los aislamientos obtenidos y iii) secuenciación genómica de aislamientos seleccionados. 4) Depositar los microorganismos aislados, en conjunto con los datos sobre lugares y secuencias, debidamente georreferenciados, en la colección de microorganismos de la Pontificia Universidad Javeriana. De esta manera se ampliará el conocimiento y registro de la diversidad microbiana en el país y se fortalecerán las colecciones de microorganismos que puedenservir de insumo para estudios futuros ecológicos y de bioprospección

      Trasplantes de microbioma de suelo: un método simple de suelo para permitir la silvicultura urbana

      Duration: 74 months

      PR.6.2018.5150

      Las visiones distópicas del futuro a menudo muestran ciudades sombrías y concretas. Por el contrario, las ciudades sostenibles son verdes, con exuberantes parques y jardines. Pero para sobrevivir, las plantas de la ciudad dependen de un microbioma: de forma análoga al microbioma humano, el microbioma de la planta proporciona diversos beneficios, desde la defensa contra los patógenos hasta el acceso al nitrógeno y al fósforo. Dentro del microbioma de la planta se encuentran los hongos micorrícicos; los hongos forman simbiosis con las raíces proporcionándoles de nutrientes provenientes del suelo a cambio del carbono que le proveen las plantas. Sin estos hongos, las plantas requerirán una fertilización costosa e insostenible o, con demasiada frecuencia, morirán. En este proyecto proponemos A) recopilar datos sobre la abundancia de micorrizas en entornos urbanos, y B) evaluar si los trasplantes de suelo de arboles locales y saludables promueven el crecimiento de plántulas plantadas en contextos urbanos. Introducción y justificación Los beneficios que proveen los árboles urbanos, los jardines de las azoteas y los jardines comunitarios en ciudades sostenibles son ampliamente reconocidos: por ejemplo las plantas filtran aire (sólo en los EE. UU., facilitan la conservación de los animales (proporcionando refugio y aumentando la conectividad del hábitat) y ofrecen servicios culturales. Para crecer bien y resistir el estrés, las plantas necesitan luz solar, agua, aire y sustrato, pero también una variedad de microbios beneficiosos, es decir, el microbioma vegetal. Los hongos del suelo que proporcionan nutrientes a las plantas a través de asociaciones simbióticas de micorrizas son especialmente críticos: los hongos reciben carbohidratos de la planta y devuelven fosfatos, nitratos e incluso agua. Sin estas asociaciones, la mayoría de las plantas crecen lentamente, requieren fertilización frecuente o mueren. Es un hecho que las plantas urbanas requieren micorrizas, sin embargo no se tiene certeza de que los inóculos comerciales sean una fuente apropiada de hongos en silvicultura urbana. Aproximadamente el 95% de las plantas vasculares del mundo pertenecen a familias que son característicamente micorrízicas. Las micorrizas pueden formarse tan pronto como una semilla germina, y mientras que hay probabilidad de que las plántulas en contextos naturales encuentren hongos micorrícicos sin intervención humana, los árboles de vivero cultivados en medios estériles probablemente no formen simbiosis micorrízicas. Para resolver este problema, los arboricultores y jardineros a menudo compran mezclas listas para usar, pero estas mezclas pueden generar más problemas que soluciones: normalmente se fabricará un inoculante a partir de unos pocos hongos fáciles de cultivar o de hongos que no son nativos de las zonas donde se aplicarán. Estas especies de malezas son potencialmente invasoras. Por ejemplo, en Colombia, la especie invasora Amanita muscaria es un problema causado directamente por la inoculación de árboles de vivero con hongos exóticos. Además, es muy probable que los hongos de mezclas comerciales así como pueden promover el crecimiento de las plantas también pueden llegar a obstaculizarlo. La razón por la que los inóculos fallan no está clara, pero tal vez los hongos exóticos y malezas, son mutualistas ineficaces, en comparación con los simbiontes locales que han evolucionado con sus hospederos.  Para promover los espacios verdes urbanos, e incluso las granjas urbanas, y para frenar la propagación de hongos invasores, nuestro objetivo es probar y promover un protocolo simple y económico para proporcionar a las plantas urbanas simbiontes locales efectivos. En esta propuesta, nos enfocamos en los árboles. Los suelos debajo de árboles urbanos saludables están llenos de hongos, y el protocolo propuesto sería útil en cualquier país: implica la inoculación de cada árbol plantado con el microbioma del suelo de un árbol cercano y sano de la misma especie.  Objetivos específicos:  OBJETIVO A. Evaluar la necesidad de inoculación en tres entornos urbanos: Madison, WI; Los Ángeles, California; y Bogotá, Colombia. Se examinarán los árboles urbanos y se probará si las plantas están escasamente colonizadas, en comparación con los árboles forestales en bosques naturales. ¿Los árboles urbanos requieren inoculación? Una hipótesis sugiere que agregar mezclas de micorrizas a los suelos es análogo a "rociar sal en el océano". Los datos servirán como una herramienta para comunicarse con los arboristas sobre la abundancia de hongos micorrícicos en las ciudades.   OBJETIVO B. Comprobar si la inoculación activa hace una diferencia para la salud de las plantas al comparar el crecimiento y la supervivencia de las plántulas tratadas con inóculos comerciales y las plántulas provistas de un trasplante de microbioma tomado de un árbol sano cercano de la misma especie.     

  • 2017
    • Hongos ectomicorrícicos introducidos en Colombia a través de plantaciones exóticas

      Duration: 24 months

      PR.6.2017.4607

      Para satisfacer la demanda global de madera, las plantaciones de árboles exóticos se han establecido en América del Sur durante la primera mitad del siglo XX. En países de Sur América como Brasil, Chile, Argentina y Uruguay, se han llevado a cabo plantaciones extensas. En Colombia, las plantaciones misceláneas se ha establecido desde la década de 1950. Una consecuencia imprevista de la plantación de árboles no nativos es la introducción simultánea y la posterior dispersión de simbiontes fúngicos, incluidos los hongos ectomicorrícicos. A través de este proyecto se busca documentar el origen de la especies micorrícicas que se encuentran en las plantaciones ubicadas en diferentes localidades en la región Andina Colombiana y documentar aquellas que se han asociado con la especies de roble nativo Quercus humboldtii. La identificación morfológica y reconstrucción filogenética de las especies encontradas será la base para conocer el origen de especies introducidas fúngicas en Colombia. Esta información, sirve como insumo para plantear propuestas que se enfoquen en la biología de la invasión de especies fúngicas introducidas y que pueden ampliar su rango de hospedero con bosque nativo.  

  • 2016
    • Diversidad genética de las poblaciones y análisis de la actividad celulolítica de Xanthomonas axonopodis pv. manihotis

      Duration: 87 months

      PR.6.2016.3767

      Una de las enfermedades que conlleva pérdidas en los cultivos de yuca es el añublo bacteriano causado por Xanthomonas axonopodis pv. manihotis (Xam). Desde 1990 se han realizado diferentes estudios analizando la diversidad genética de las poblaciones de Xam y se reportó alta diversidad poblacional y cambio rápido en el tiempo. La alta diversidad de Xam ha conllevado a la pérdida de resistencia de las variedades de yuca cultivadas y a la necesidad de desarrollar nuevas estrategias para controlar la enfermedad. Además, los estudios muestran la importancia de analizar continuamente las dinámicas poblaciones. El objetivo de este estudio es utilizar análisis de repeticiones en tándem de número variable (VNTRs) para caracterizar poblaciones de Xam y analizar si se conserva alta diversidad de poblaciones en la localidad de Chinú-Colombia. Para desarrollar el estudio, las cepas de Xam colectadas en la localidad de Chinú durante el 2014 y las cepas más diversas encontradas en los estudios de los 90s y 2008 a 2010, serán analizadas utilizando primers para amplificar 4 loci minisatelites y 18 loci microsatélites. Los resultados del proyecto permitirán evaluar la técnica de VNTRs previamente estandarizada y analizar la diversidad de Xam en el tiempo en la localidad de Chinú. 

      Reconocimiento de especies fúngicas saprotrofas existentes en los bosques del municipio de Villapinzón, para mejorar las alternativas económicas y nutricionales de los pobladores.

      Duration: 24 months

      PR.6.2016.3748

      Con el presente proyecto interfacultades se busca consolidar un sistema de producción de hongos comestibles en el Municipio de Villa Pinzón, Cundinamarca, mediante un estudio de campo y taxonómico para identificar las especies nativas de las zonas, y resaltando aquellas de las cuales se pueda sacar un beneficio en su uso (CIENCIAS). Con base en las especies identificadas, se diseñará y desarrollará la cadena de abastecimiento para la recolección, producción, distribución y comercialización de los hongos. Se realizará énfasis en aspectos técnicos, económicos y de mercado (INGENIERIA). Finalmente, se propondrán y pondrán en marcha estrategias de apropiación de conocimiento y empoderamiento, que permitan a los habitantes de la región hacer un uso y explotación sostenible de dichos productos

  • 2006
    • Diversidad de Phytophthora en solanáceas y otros cultivos de importancia económica en Colombia

      Duration: 36 months

      PR.3.2005.443.srestrep